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scnpilot_solids1_trim150_scaffold_2007

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2007_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..243)
DNA (243bp) protein (81aa)
Small heat shock protein (HSP20) family n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B067_9RHIZ
Precorrin-6X reductase {ECO:0000313|EMBL:KFC68471.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
small heat shock protein (HSP20) family
scnpilot_solids1_trim150_scaffold_2007_2
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(310..810)
DNA (501bp) protein (167aa)
Activator of Hsp90 ATPase 1 family protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TTY6_ALIDB
Activator of Hsp90 ATPase 1 family protein
ATPase 1 family protein {ECO:0000313|EMBL:GAO25987.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_solids1_trim150_scaffold_2007_3
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1045..2376
DNA (1332bp) protein (444aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TNT3_ACIAC
RND family efflux transporter MFP subunit; K07799 putative multidrug efflux transporter MdtA
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ABM32621.1}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
scnpilot_solids1_trim150_scaffold_2007_4
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2493..3671
DNA (1179bp) protein (393aa)
acriflavin resistance protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002E16C9D
Acriflavin resistance protein {ECO:0000313|EMBL:CDS54577.1}; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
acriflavin resistance protein; K07788 RND superfamily, multidrug transport protein MdtB
scnpilot_solids1_trim150_scaffold_2007_5
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3626..5245
DNA (1620bp) protein (540aa)
acriflavin resistance protein n=1 Tax=Variovorax paradoxus RepID=UPI0003694BA5
acriflavin resistance protein; K07788 RND superfamily, multidrug transport protein MdtB
Acriflavin resistance protein {ECO:0000313|EMBL:ACS20224.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
scnpilot_solids1_trim150_scaffold_2007_6
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5238..5978
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V4B8_VARPE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_solids1_trim150_scaffold_2007_7
unknown

Not on your lists

comp(6358..6459)
DNA (102bp) protein (34aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2007_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6510..9017
DNA (2508bp) protein (836aa)
Acriflavin resistance protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CTN5_VARPS
acriflavin resistance protein; K07789 RND superfamily, multidrug transport protein MdtC
Acriflavin resistance protein {ECO:0000313|EMBL:ACS20223.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
scnpilot_solids1_trim150_scaffold_2007_9
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9014..10438
DNA (1425bp) protein (475aa)
NodT family RND efflux system outer membrane lipoprotein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BRV4_9BURK rbh
NodT family RND efflux system outer membrane lipoprotein {ECO:0000313|EMBL:EHL24970.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
outer membrane efflux protein, NodT family rbh
scnpilot_solids1_trim150_scaffold_2007_10
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10590..11129
DNA (540bp) protein (180aa)
Cytochrome c oxidase subunit II n=1 Tax=Rhodanobacter denitrificans RepID=I4WWW6_9GAMM
heme/copper-type cytochrome/quinol oxidase, subunit 2
Heme/copper-type cytochrome/quinol oxidase, subunit 2 {ECO:0000313|EMBL:AGG89571.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_2007_11
Rhodanobacter denitrificans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11132..12793
DNA (1662bp) protein (554aa)
Heme/copper-type cytochrome/quinol oxidase, subunit 1 n=1 Tax=Rhodanobacter denitrificans RepID=M4NHL2_9GAMM
heme/copper-type cytochrome/quinol oxidase, subunit 1
Heme/copper-type cytochrome/quinol oxidase, subunit 1 {ECO:0000313|EMBL:AGG89572.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;"
scnpilot_solids1_trim150_scaffold_2007_12
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13080..13631
DNA (552bp) protein (184aa)
Putative transmembrane protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WDA5_9GAMM
Putative transmembrane protein {ECO:0000313|EMBL:EIL97446.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2007_13
Pseudomonas taeanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13642..14652)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Pseudomonas alcaligenes OT 69 RepID=U3H4X1_PSEAC
AraC family transcriptional regulator {ECO:0000313|EMBL:KFX69460.1}; TaxID=1395571 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas taeanensis MS-3.;"
AraC family transcriptional regulator
scnpilot_solids1_trim150_scaffold_2007_14
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14927..16669
DNA (1743bp) protein (581aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KWK2_9BURK rbh
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:EGI75850.1}; TaxID=887062 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis ATCC 19624.;"
chemotaxis sensory transducer
scnpilot_solids1_trim150_scaffold_2007_15
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16772..17281
DNA (510bp) protein (170aa)
CheW protein n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0QAN1_ACIAP
CheW protein; K03408 purine-binding chemotaxis protein CheW
CheW protein {ECO:0000313|EMBL:ADX46072.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
scnpilot_solids1_trim150_scaffold_2007_16
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17372..18898
DNA (1527bp) protein (509aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q1L2_ACIAP rbh
methyl-accepting chemotaxis sensory transducer rbh
Tax=GWA2_Curvibacter_64_110_curated
scnpilot_solids1_trim150_scaffold_2007_17
Shewanella sp. MR-7, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19035..21062
DNA (2028bp) protein (676aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Shewanella sp. (strain MR-4) RepID=Q0HI89_SHESM rbh
diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) rbh
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:ABI43220.1}; TaxID=60481 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella sp. (strain MR-7).;"
scnpilot_solids1_trim150_scaffold_2007_18
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21183..21791
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J1ESC7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJE55029.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2007_19
Thauera sp. MZ1T, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21965..22438)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Thauera sp. (strain MZ1T) RepID=C4ZNC5_THASP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK53772.1}; TaxID=85643 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. (strain MZ1T).;"
scnpilot_solids1_trim150_scaffold_2007_20
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22544..23110)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WC83_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD37358.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
hypothetical protein
Displaying 20 items

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