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scnpilot_solids1_trim150_scaffold_6317

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_6317_1
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..202
DNA (201bp) protein (67aa)
Sulfoxide reductase catalytic subunit YedY {ECO:0000256|HAMAP-Rule:MF_01206, ECO:0000256|SAAS:SAAS00016472}; EC=1.8.-.- {ECO:0000256|HAMAP-Rule:MF_01206, ECO:0000256|SAAS:SAAS00016459};; Flags: Precursor;; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis str. Niagara R.;"
Sulfoxide reductase catalytic subunit YedY n=1 Tax=Comamonas testosteroni (strain CNB-2) RepID=D0IZF8_COMT2
Twin-arginine translocation pathway signal; K07147
scnpilot_solids1_trim150_scaffold_6317_2
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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202..879
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003654C0A
Sulfoxide reductase heme-binding subunit YedZ {ECO:0000256|HAMAP-Rule:MF_01207, ECO:0000256|SAAS:SAAS00016679}; Flavocytochrome YedZ {ECO:0000256|HAMAP-Rule:MF_01207}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
ferric reductase
scnpilot_solids1_trim150_scaffold_6317_3
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(907..2196)
DNA (1290bp) protein (430aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
diaminopimelate decarboxylase; K01586 diaminopimelate decarboxylase [EC:4.1.1.20]
diaminopimelate decarboxylase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036FA618 rbh
scnpilot_solids1_trim150_scaffold_6317_4
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2396..4633)
DNA (2238bp) protein (746aa)
penicillin-binding protein, 1a family; K05366 penicillin-binding protein 1A [EC:2.4.1.- 3.4.-.-]
Penicillin-binding protein, 1A family n=2 Tax=Alicycliphilus denitrificans RepID=E8TZQ7_ALIDB
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:ADU98604.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scnpilot_solids1_trim150_scaffold_6317_5
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4996..5397
DNA (402bp) protein (134aa)
type IV pilus assembly protein PilM; K02662 type IV pilus assembly protein PilM
type IV pilus assembly protein PilM id=12549495 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_solids1_trim150_scaffold_6317_6
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5385..6038
DNA (654bp) protein (218aa)
Type IV pilus assembly protein PilM n=1 Tax=Acidovorax delafieldii 2AN RepID=C5SZR8_ACIDE
type IV pilus assembly protein PilM
Type IV pilus assembly protein PilM {ECO:0000313|EMBL:EER62234.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
scnpilot_solids1_trim150_scaffold_6317_7
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6035..6313
DNA (279bp) protein (93aa)
Tfp pilus assembly protein PilN {ECO:0000313|EMBL:GAD23099.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
Fimbrial assembly family protein; K02663 type IV pilus assembly protein PilN id=12549496 bin=BDI species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BDI organism_group=Betaproteobacteria
fimbrial assembly family protein; K02663 type IV pilus assembly protein PilN
Displaying 7 items

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