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scnpilot_solids1_trim150_scaffold_6778

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_6778_1
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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44..322
-----------------
DNA (279bp)
protein (93aa)
30S ribosomal protein S19 n=2 Tax=Acidovorax RepID=RS19_ACIAC
30S ribosomal protein S19; K02965 small subunit ribosomal protein S19
30S ribosomal protein S19 {ECO:0000255|HAMAP-Rule:MF_00531}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
scnpilot_solids1_trim150_scaffold_6778_2
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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332..664
-----------------
DNA (333bp)
protein (111aa)
50S ribosomal protein L22 n=2 Tax=Alicycliphilus denitrificans RepID=E8TVI2_ALIDB
50S ribosomal protein L22; K02890 large subunit ribosomal protein L22
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scnpilot_solids1_trim150_scaffold_6778_3
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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681..1553
-----------------
DNA (873bp)
protein (291aa)
30S ribosomal protein S3 n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T6A7_ACIDE rbh
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 rbh
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
scnpilot_solids1_trim150_scaffold_6778_4
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1556..2095
-----------------
DNA (540bp)
protein (180aa)
50S ribosomal protein L16 n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q4G5_ACIAP
50S ribosomal protein L16; K02878 large subunit ribosomal protein L16
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
scnpilot_solids1_trim150_scaffold_6778_5
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2092..2361
-----------------
DNA (270bp)
protein (90aa)
30S ribosomal protein S17 n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000378361F
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
30S ribosomal protein S17; K02961 small subunit ribosomal protein S17
scnpilot_solids1_trim150_scaffold_6778_6
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2478..2984
-----------------
DNA (507bp)
protein (169aa)
Redoxin domain protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TVI7_ALIDB
redoxin domain protein
Thioredoxin fold-haboring protein {ECO:0000313|EMBL:GAO26103.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_solids1_trim150_scaffold_6778_7
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3005..3553)
-----------------
DNA (549bp)
protein (183aa)
GCN5 family acetyltransferase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036B4846
GCN5 family acetyltransferase {ECO:0000313|EMBL:KJA10919.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
GCN5-like N-acetyltransferase
scnpilot_solids1_trim150_scaffold_6778_8
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3641..4045
-----------------
DNA (405bp)
protein (135aa)
PTS system fructose subfamily transporter subunit IIA; K02821 PTS system, ascorbate-specific IIA component [EC:2.7.1.69]
PTS fructose transporter subunit IIA n=2 Tax=Acidovorax sp. MR-S7 RepID=UPI00036AAA36
Phosphotransferase system, mannose/fructose-specific component IIA {ECO:0000313|EMBL:GAD21801.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
scnpilot_solids1_trim150_scaffold_6778_9
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4054..4323
-----------------
DNA (270bp)
protein (90aa)
phosphocarrier protein HPr n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035C9A0E
HPrNtr; K11189 phosphocarrier protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_solids1_trim150_scaffold_6778_10
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4445..5695
-----------------
DNA (1251bp)
protein (417aa)
phosphoenolpyruvate--protein phosphotransferase (EC:2.7.3.9); K08483 phosphotransferase system, enzyme I, PtsI [EC:2.7.3.9]
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax citrulli (strain AAC00-1) (Acidovorax avenae subsp.; citrulli).;"
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TJ23_ACIAC
scnpilot_solids1_trim150_scaffold_6778_11
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5637..5996
-----------------
DNA (360bp)
protein (120aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
phosphoenolpyruvate--protein phosphotransferase (EC:2.7.3.9); K08483 phosphotransferase system, enzyme I, PtsI [EC:2.7.3.9]
phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000365521D
scnpilot_solids1_trim150_scaffold_6778_12
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6064..6510)
-----------------
DNA (447bp)
protein (149aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000256|HAMAP-Rule:MF_00013}; Lipoyl/octanoyl transferase {ECO:0000256|HAMAP-Rule:MF_00013}; Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Aci
lipoate-protein ligase B (EC:2.3.1.181); K03801 lipoyl(octanoyl) transferase [EC:2.3.1.181]
Octanoyltransferase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C2D0_9BURK
scnpilot_solids1_trim150_scaffold_6778_13
unknown

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comp(6507..6689)
-----------------
DNA (183bp)
protein (61aa)
lipoate-protein ligase B n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI0002374FEC
scnpilot_solids1_trim150_scaffold_6778_14
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6689..6934)
-----------------
DNA (246bp)
protein (82aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0HW98_9BURK
hypothetical protein
UPF0250 protein C380_01970 {ECO:0000256|HAMAP-Rule:MF_00659}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
scnpilot_solids1_trim150_scaffold_6778_15
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6983..7618
-----------------
DNA (636bp)
protein (212aa)
ATP synthase I chain n=2 Tax=Acidovorax RepID=B9MB96_ACIET
ATP synthase subunit I; K02116 ATP synthase protein I
Putative ATP synthase protein I {ECO:0000313|EMBL:ABM40555.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_solids1_trim150_scaffold_6778_16
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7754..8344
-----------------
DNA (591bp)
protein (197aa)
ATP synthase F0 subunit A; K02108 F-type H+-transporting ATPase subunit a [EC:3.6.3.14]
ATP synthase subunit a n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q4I8_ACIAP
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
scnpilot_solids1_trim150_scaffold_6778_17
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8425..8688
-----------------
DNA (264bp)
protein (88aa)
ATP synthase F0 C subunit; K02110 F-type H+-transporting ATPase subunit c [EC:3.6.3.14]
F0F1 ATP synthase subunit C n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034C457A
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242778}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
scnpilot_solids1_trim150_scaffold_6778_18
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8790..9260
-----------------
DNA (471bp)
protein (157aa)
F0F1 ATP synthase subunit B (EC:3.6.3.14)
F0F1 ATP synthase subunit B n=1 Tax=Comamonas sp. B-9 RepID=UPI000395C2F1
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Displaying 18 items

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