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scnpilot_solids1_trim150_scaffold_4041

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_4041_1
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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270..977
DNA (708bp) protein (236aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WU01_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHR69323.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_4041_2
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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974..1303
DNA (330bp) protein (110aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WU00_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHR69322.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_4041_3
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1300..1818
DNA (519bp) protein (173aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WTZ9_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHR69321.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_4041_4
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1805..2698
DNA (894bp) protein (298aa)
Dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WTZ8_9BURK rbh
Dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis {ECO:0000313|EMBL:EHR69320.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
putative HesA/moeB/thiF family protein
scnpilot_solids1_trim150_scaffold_4041_5
unknown

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comp(3035..3181)
DNA (147bp) protein (49aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_4041_6
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3178..4449)
DNA (1272bp) protein (424aa)
TrbI-like protein n=1 Tax=Pseudomonas aeruginosa U2504 RepID=U8ZR26_PSEAI
Conjugative transfer protein TrbI {ECO:0000313|EMBL:GAO26454.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
conjugation TrbI family protein; K03195 type IV secretion system protein VirB10
scnpilot_solids1_trim150_scaffold_4041_7
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4452..5444)
DNA (993bp) protein (331aa)
P-type conjugative transfer protein TrbG n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TV26_ALIDB rbh
p-type conjugative transfer protein trbg; K03204 type IV secretion system protein VirB9 rbh
P-type conjugative transfer protein TrbG {ECO:0000313|EMBL:ADV00558.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
scnpilot_solids1_trim150_scaffold_4041_8
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5441..5659)
DNA (219bp) protein (73aa)
Conjugal transfer protein n=2 Tax=Comamonadaceae RepID=A9BTR6_DELAS
VirB8 protein {ECO:0000313|EMBL:KCV66829.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;"
conjugal transfer protein TrbF; K03200 type IV secretion system protein VirB5
scnpilot_solids1_trim150_scaffold_4041_9
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5656..6030)
DNA (375bp) protein (125aa)
Conjugal transfer protein n=2 Tax=Comamonadaceae RepID=A9BTR6_DELAS
conjugal transfer protein TrbF; K03200 type IV secretion system protein VirB5
Conjugal transfer protein {ECO:0000313|EMBL:ABX35330.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
scnpilot_solids1_trim150_scaffold_4041_10
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6042..7019)
DNA (978bp) protein (326aa)
P-type conjugative transfer protein TrbL n=2 Tax=Comamonas RepID=B7WYQ5_COMTE
P-type conjugative transfer protein TrbL {ECO:0000313|EMBL:KCV66864.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;"
conjugal transfer protein TrbL; K07344 type IV secretion system protein TrbL
Displaying 10 items

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