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scnpilot_solids1_trim150_scaffold_4445

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_4445_1
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..388
DNA (387bp) protein (129aa)
glutamate--tRNA ligase (EC:6.1.1.17); K01894 glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
Glutamyl-Q tRNA(Asp) synthetase {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0000256|SAAS:SAAS00018238}; Short=Glu-Q-RSs {ECO:0000256|HAMAP-Rule:MF_01428};; EC=6.1.1.- {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0000256|SAAS:SAAS00018222};; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
Glutamyl-Q tRNA(Asp) synthetase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MJA1_ACIET
scnpilot_solids1_trim150_scaffold_4445_2
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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343..1101
DNA (759bp) protein (253aa)
trmB; tRNA (guanine-n(7)-)-methyltransferase (EC:2.1.1.33); K03439 tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] rbh
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MJA0_ACIET rbh
scnpilot_solids1_trim150_scaffold_4445_3
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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1209..3026
DNA (1818bp) protein (606aa)
Uncharacterized protein n=1 Tax=Pseudomonas alcaligenes NBRC 14159 RepID=U3B1Q1_PSEAC
Uncharacterized protein {ECO:0000313|EMBL:GAD63789.1}; TaxID=1215092 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcaligenes NBRC 14159.;"
diguanylate cyclase/phosphodiesterase
scnpilot_solids1_trim150_scaffold_4445_4
Methylobacillus flagellatus, Methylobacillus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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2978..4048
DNA (1071bp) protein (357aa)
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) RepID=Q1H2A5_METFK
diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) {ECO:0000313|EMBL:ABE49382.1}; TaxID=265072 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylobacillus.;" source="Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875).;"
scnpilot_solids1_trim150_scaffold_4445_5
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4439..5356)
DNA (918bp) protein (306aa)
Peptidase family M48 n=1 Tax=Acidovorax sp. CF316 RepID=J0K8H0_9BURK rbh
Peptidase family M48 {ECO:0000313|EMBL:EJE49890.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
TPR repeat-containing Zn-dependent protease
scnpilot_solids1_trim150_scaffold_4445_6
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5353..5868)
DNA (516bp) protein (172aa)
SH3 type 3 domain protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T7D9_ACIDE
SH3 type 3 domain protein {ECO:0000313|EMBL:EER59614.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
SH3 type 3 domain protein
scnpilot_solids1_trim150_scaffold_4445_7
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5865..7583)
DNA (1719bp) protein (573aa)
adenylate/guanylate cyclase with Chase sensor; K01768 adenylate cyclase [EC:4.6.1.1]
Adenylate/guanylate cyclase with Chase sensor n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T7E0_ACIDE
Adenylate/guanylate cyclase with Chase sensor {ECO:0000313|EMBL:EER59615.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
scnpilot_solids1_trim150_scaffold_4445_8
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7952..9184
DNA (1233bp) protein (411aa)
GGDEF domain-containing protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C4V0_9BURK
GGDEF domain-containing protein {ECO:0000313|EMBL:EHL20329.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
signal protein
scnpilot_solids1_trim150_scaffold_4445_9
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9199..9933)
DNA (735bp) protein (245aa)
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB {ECO:0000256|HAMAP-Rule:MF_01887}; EC=2.1.1.185 {ECO:0000256|HAMAP-Rule:MF_01887};; 23S rRNA (guanosine2251 2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01887}; 23S rRNA Gm2251 2'-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01887}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis str. Niagara R.;"
rlmB; 23S rRNA (guanosine-2'-O-)-methyltransferase; K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] rbh
23S rRNA (guanosine-2'-O-)-methyltransferase RlmB n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XX65_RAMTT rbh
scnpilot_solids1_trim150_scaffold_4445_10
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10002..11426
DNA (1425bp) protein (475aa)
cardiolipin synthetase 2 (EC:2.7.8.-); K06131 cardiolipin synthase [EC:2.7.8.-]
cardiolipin synthase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035E3918
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthases and related enzymes {ECO:0000313|EMBL:GAD23722.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
scnpilot_solids1_trim150_scaffold_4445_11
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11417..12118)
DNA (702bp) protein (234aa)
ABC transporter related protein n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W858_ACISJ rbh
ABC transporter {ECO:0000313|EMBL:KJA12198.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
ABC transporter-like protein; K02003 putative ABC transport system ATP-binding protein rbh
scnpilot_solids1_trim150_scaffold_4445_12
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12132..12773
DNA (642bp) protein (214aa)
Arylesterase (EC:3.1.1.2); K10804 acyl-CoA thioesterase I [EC:3.1.2.- 3.1.1.5]
Arylesterase {ECO:0000313|EMBL:AEB85208.1}; EC=3.1.1.2 {ECO:0000313|EMBL:AEB85208.1};; Flags: Precursor;; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Arylesterase n=2 Tax=Alicycliphilus denitrificans RepID=E8TRR3_ALIDB
scnpilot_solids1_trim150_scaffold_4445_13
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12818..13147)
DNA (330bp) protein (110aa)
cys/met metabolism pyridoxal-phosphate-dependent protein; K01760 cystathionine beta-lyase [EC:4.4.1.8]
Cystathionine beta-lyase {ECO:0000313|EMBL:AEB85210.1}; EC=4.4.1.8 {ECO:0000313|EMBL:AEB85210.1};; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Cys/Met metabolism pyridoxal-phosphate-dependent protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TRR5_ALIDB
Displaying 13 items

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