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scnpilot_solids1_trim150_scaffold_27963

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_27963_1
CG_Rhodof_01, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..403
DNA (402bp) protein (134aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTV2_9BURK
binding-protein dependent transport system inner membrane protein; K02050 NitT/TauT family transport system permease protein
Tax=CG_Rhodof_01
scnpilot_solids1_trim150_scaffold_27963_2
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(407..796)
DNA (390bp) protein (130aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. M
hypothetical protein; K00783 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
50S rRNA methyltransferase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000373FA20
scnpilot_solids1_trim150_scaffold_27963_3
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(809..1183)
DNA (375bp) protein (125aa)
Ribosomal silencing factor RsfS n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GBD2_ALIDK
iojap-like protein; K09710 ribosome-associated protein
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
scnpilot_solids1_trim150_scaffold_27963_4
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1554..2489)
DNA (936bp) protein (312aa)
Oxygen-dependent coproporphyrinogen-III oxidase {ECO:0000256|HAMAP-Rule:MF_00333}; Short=CPO {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coprogen oxidase {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coproporphyrinogenase {ECO:0000256|HAMAP-Rule:MF_00333};; EC=1.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00333};; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
coproporphyrinogen oxidase (EC:1.3.3.3); K00228 coproporphyrinogen III oxidase [EC:1.3.3.3] rbh
Coproporphyrinogen-III oxidase, aerobic n=1 Tax=Acidovorax sp. CF316 RepID=J1EBZ7_9BURK rbh
scnpilot_solids1_trim150_scaffold_27963_5
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2609..3424)
DNA (816bp) protein (272aa)
phosphoribosylamine/glycine ligase (EC:6.3.4.13); K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13]
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
Phosphoribosylamine--glycine ligase n=2 Tax=Alicycliphilus denitrificans RepID=E8U0F4_ALIDB
scnpilot_solids1_trim150_scaffold_27963_6
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3507..4076)
DNA (570bp) protein (190aa)
transcriptional regulator n=1 Tax=Curvibacter lanceolatus RepID=UPI000377B1D2
hypothetical protein
Probable transcriptional regulatory protein CtesDRAFT_PD1725 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
Displaying 6 items

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