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scnpilot_solids1_trim150_scaffold_14392

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_14392_1
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..753
DNA (753bp) protein (251aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
ATP-dependent protease La (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53]
Lon protease n=1 Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I7J8_RHOVT
scnpilot_solids1_trim150_scaffold_14392_2
R_Curvibacter_63_18, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(740..1630)
DNA (891bp) protein (297aa)
hypothetical protein id=12557254 bin=CNBR_ACIDO species=Limnohabitans sp. Rim47 genus=Limnohabitans taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? rbh
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated
scnpilot_solids1_trim150_scaffold_14392_3
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2070..3098
DNA (1029bp) protein (343aa)
Cyclic pyranopterin monophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01225}; EC=4.1.99.18 {ECO:0000256|HAMAP-Rule:MF_01225};; Molybdenum cofactor biosynthesis protein A {ECO:0000256|HAMAP-Rule:MF_01225}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
Cyclic pyranopterin monophosphate synthase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T5L9_ACIDE
molybdenum cofactor biosynthesis protein A; K03639 molybdenum cofactor biosynthesis protein
scnpilot_solids1_trim150_scaffold_14392_4
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3053..3604)
DNA (552bp) protein (184aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Peptide deformylase; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
peptide deformylase n=1 Tax=Acidovorax radicis RepID=UPI000237517E
peptide deformylase
scnpilot_solids1_trim150_scaffold_14392_5
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3619..4059
DNA (441bp) protein (147aa)
membrane protein n=1 Tax=Acidovorax avenae RepID=UPI0002DCB338
hypothetical protein; K09790 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX37485.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
scnpilot_solids1_trim150_scaffold_14392_trna_1
unknown

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4093..4165
DNA (73bp)
transferRNA Asn
scnpilot_solids1_trim150_scaffold_14392_trna_2
unknown

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4214..4293
DNA (80bp)
transferRNA Asn
scnpilot_solids1_trim150_scaffold_14392_6
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4407..4892
DNA (486bp) protein (162aa)
dehydrogenase n=1 Tax=Acidovorax radicis RepID=UPI00023758E2
electron-transferring-flavoprotein dehydrogenase
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
Displaying 8 items

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