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scnpilot_solids1_trim150_scaffold_3029

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_3029_1
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..447)
DNA (447bp) protein (149aa)
cytochrome B n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003755ADF
Cytochrome b {ECO:0000256|RuleBase:RU003385}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
cytochrome b/b6 domain-containing protein; K00412 ubiquinol-cytochrome c reductase cytochrome b subunit
scnpilot_solids1_trim150_scaffold_3029_2
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(458..1060)
DNA (603bp) protein (201aa)
ubiquinol-cytochrome c reductase, iron-sulfur subunit (EC:1.10.2.2); K00411 ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:1.10.2.2]
Ubiquinol-cytochrome c reductase iron-sulfur subunit {ECO:0000256|RuleBase:RU004494}; EC=1.10.2.2 {ECO:0000256|RuleBase:RU004494};; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
Ubiquinol-cytochrome c reductase iron-sulfur subunit n=2 Tax=Alicycliphilus denitrificans RepID=E8U0C0_ALIDB
scnpilot_solids1_trim150_scaffold_3029_3
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1485..2519)
DNA (1035bp) protein (345aa)
4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262); K00097 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] rbh
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W456_ACISJ rbh
scnpilot_solids1_trim150_scaffold_3029_4
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2539..3300)
DNA (762bp) protein (254aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G7W6_ALIDK rbh
NGG1p interacting factor 3 protein, NIF3 rbh
scnpilot_solids1_trim150_scaffold_3029_5
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3351..4496
DNA (1146bp) protein (382aa)
htra2 peptidase (EC:3.4.21.108) rbh
2-alkenal reductase n=1 Tax=Verminephrobacter aporrectodeae RepID=UPI000237766C rbh
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain {ECO:0000313|EMBL:GAD23151.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
scnpilot_solids1_trim150_scaffold_3029_6
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4512..5312)
DNA (801bp) protein (267aa)
twin-arginine protein translocation system subunit TatC n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003818C82
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
Sec-independent protein translocase, TatC subunit; K03118 sec-independent protein translocase protein TatC
scnpilot_solids1_trim150_scaffold_3029_7
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5387..5872)
DNA (486bp) protein (162aa)
translocase n=1 Tax=Acidovorax radicis RepID=UPI0002377F4E
tatB; sec-independent translocase
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
scnpilot_solids1_trim150_scaffold_3029_8
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5893..6141)
DNA (249bp) protein (83aa)
Sec-independent protein translocase protein TatA n=2 Tax=Alicycliphilus denitrificans RepID=E8U0B3_ALIDB
twin-arginine translocation protein, TatA/E family subunit; K03116 sec-independent protein translocase protein TatA
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_solids1_trim150_scaffold_3029_9
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6218..6577)
DNA (360bp) protein (120aa)
Histidine triad (HIT) protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MDW8_ACIET
histidine triad (hit) protein; K02503 Hit-like protein involved in cell-cycle regulation
Histidine triad (HIT) protein {ECO:0000313|EMBL:ACM32222.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scnpilot_solids1_trim150_scaffold_3029_10
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6600..7625)
DNA (1026bp) protein (342aa)
patatin n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037B4459 rbh
Predicted esterase of the alpha-beta hydrolase superfamily {ECO:0000313|EMBL:GAD23146.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
patatin; K07001 NTE family protein
scnpilot_solids1_trim150_scaffold_3029_11
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7618..8004)
DNA (387bp) protein (129aa)
Putative transmembrane protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MDW6_ACIET
hypothetical protein
Putative transmembrane protein {ECO:0000313|EMBL:ACM32220.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (strain TPSY) (Diaphorobacter sp. (strain TPSY)).;"
scnpilot_solids1_trim150_scaffold_3029_12
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8001..8387)
DNA (387bp) protein (129aa)
hisE; phosphoribosyl-ATP pyrophosphatase (EC:3.6.1.31)
Phosphoribosyl-ATP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071052}; Short=PRA-PH {ECO:0000256|HAMAP-Rule:MF_01020};; EC=3.6.1.31 {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071044};; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
Phosphoribosyl-ATP pyrophosphatase n=1 Tax=Acidovorax sp. KKS102 RepID=K0HNT4_9BURK
Displaying 12 items

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