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scnpilot_solids1_trim150_scaffold_2259_7

Organism: SCNPILOT_SOLID_1_TRIM150_Burkholderiales_65_78

partial RP 29 / 55 MC: 1 BSCG 30 / 51 MC: 1 ASCG 10 / 38
Location: 5498..5848

Top 3 Functional Annotations

Value Algorithm Source
RNP-1 like RNA-binding protein id=12552700 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 83.8
  • Coverage: 117.0
  • Bit_score: 193
  • Evalue 1.60e-46
RNP-1 like RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 80.2
  • Coverage: 116.0
  • Bit_score: 190
  • Evalue 2.40e-46
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 83.8
  • Coverage: 117.0
  • Bit_score: 193
  • Evalue 1.70e-46

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Taxonomy

RLO_Burkholderiales_65_40 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 351
ATGAGCAGCAAAATCTACGTGGGCAACCTGCCCTATTCCGTGACCAATTCCATCCTGGAAAGCAACTTCGCCGAGTTCGGCAGCGTTTCGTCCGCCAAGGTCATGATGGATCGCGATACCGGCCGCTCCAAGGGCTTTGGTTTTGTGGAGATGGCGTCTGCGGACGTCGCCCAGGCCGCCATCAAGGCGCTGAACGGCATGTCCGTGGATGGACGCTCGATCGTCGTGAACCTGGCCCGCCCTCGCGAAGAAAGCCGTGGTTCGGGTGGCTACGGTGCGGCCGGTTTCAAGGCCCCGGCGCGAGAGCACGTTGGCTATGGCAATGGCGGCTACGGCGGTGGCCGTTACTGA
PROTEIN sequence
Length: 117
MSSKIYVGNLPYSVTNSILESNFAEFGSVSSAKVMMDRDTGRSKGFGFVEMASADVAQAAIKALNGMSVDGRSIVVNLARPREESRGSGGYGAAGFKAPAREHVGYGNGGYGGGRY*