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scnpilot_solids1_trim150_scaffold_2259

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2259_1
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..357
DNA (357bp) protein (119aa)
ruvC; holliday junction resolvase (EC:3.1.22.4); K01159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4]
Crossover junction endodeoxyribonuclease RuvC {ECO:0000255|HAMAP-Rule:MF_00034}; EC=3.1.22.4 {ECO:0000255|HAMAP-Rule:MF_00034};; Holliday junction nuclease RuvC {ECO:0000255|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000255|HAMAP-Rule:MF_00034}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Acidovorax sp. (strain JS42) RepID=RUVC_ACISJ
scnpilot_solids1_trim150_scaffold_2259_2
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(351..1040)
DNA (690bp) protein (230aa)
DSBA oxidoreductase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W3S4_ACISJ rbh
DSBA oxidoreductase rbh
DSBA oxidoreductase {ECO:0000313|EMBL:ABM40899.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_solids1_trim150_scaffold_2259_3
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1161..1979
DNA (819bp) protein (273aa)
Putative uncharacterized protein n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KNZ0_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EYC51430.1}; TaxID=1458275 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis str. Niagara R.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_2259_4
Candidatus Accumulibacter sp. SK-12, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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1996..3762
DNA (1767bp) protein (589aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00034C68A7
Bacteriophytochrome cph2 {ECO:0000313|EMBL:EXI66510.1}; TaxID=1454001 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-12.;"
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
scnpilot_solids1_trim150_scaffold_2259_5
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4628..4921
DNA (294bp) protein (98aa)
RNP-1 like RNA-binding protein n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X2B4_COMTE
RNA-binding protein {ECO:0000313|EMBL:AIJ49627.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni TK102.;"
RNP-1 like RNA-binding protein
scnpilot_solids1_trim150_scaffold_2259_6
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5171..5380
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI00023762C7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX36279.1}; TaxID=398578 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (strain DSM 14801 / SPH-1).;"
scnpilot_solids1_trim150_scaffold_2259_7
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5498..5848
DNA (351bp) protein (117aa)
RNP-1 like RNA-binding protein id=12552700 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
RNP-1 like RNA-binding protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_solids1_trim150_scaffold_2259_8
unknown

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comp(6257..6466)
DNA (210bp) protein (70aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2259_9
unknown

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6658..6837
DNA (180bp) protein (60aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2259_10
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6759..8270)
DNA (1512bp) protein (504aa)
AMP-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3]
AMP-dependent synthetase n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003796555
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II {ECO:0000313|EMBL:GAD23560.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
scnpilot_solids1_trim150_scaffold_2259_11
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8319..10373)
DNA (2055bp) protein (685aa)
penicillin-binding protein 1C; K05367 penicillin-binding protein 1C [EC:2.4.1.-]
penicillin-binding protein 1C n=1 Tax=Comamonas sp. B-9 RepID=UPI000395900D
Penicillin-binding protein 1c {ECO:0000313|EMBL:GAO24517.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_solids1_trim150_scaffold_2259_12
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10370..10558)
DNA (189bp) protein (63aa)
PAS/PAC and Chase sensor-containing diguanylate cyclase/phosphodiesterase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BW02_9BURK
PAS/PAC and Chase sensor-containing diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:EHL23381.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
PAS/PAC and Chase sensor-containing diguanylate cyclase/phosphodiesterase
Displaying 12 items

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