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scnpilot_solids1_trim150_scaffold_4093_6

Organism: SCNPILOT_SOLID_1_TRIM150_Burkholderiales_65_78

partial RP 29 / 55 MC: 1 BSCG 30 / 51 MC: 1 ASCG 10 / 38
Location: 4775..5401

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide transport periplasmic protein LptA n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q5A2_ACIAP similarity UNIREF
DB: UNIREF100
  • Identity: 62.7
  • Coverage: 204.0
  • Bit_score: 231
  • Evalue 9.20e-58
Lipopolysaccharide export system protein LptA {ECO:0000256|HAMAP-Rule:MF_01914}; Flags: Precursor;; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.9
  • Coverage: 214.0
  • Bit_score: 232
  • Evalue 5.80e-58
lipopolysaccharide transport periplasmic protein LptA; K09774 lipopolysaccharide export system protein LptA similarity KEGG
DB: KEGG
  • Identity: 62.7
  • Coverage: 204.0
  • Bit_score: 231
  • Evalue 2.90e-58

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Taxonomy

Acidovorax temperans → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 627
ATGAAACACTCTTCCGCCCTGCTGCTCGTCGGCGCGCTGCTGCTCACCGTGGTCAGCGGCGTGCGAGCTGAGCGAGCGGACCGTGACCAGCCCATGCACATCGAGGCCGACAGCCTGCTGCATGACGAAACCACGCAGACCAGCGTGTTCACGGGCAATGTCGTGATCACCAAGGGCACCATCGTGCTGCGCGGCGGCCGGGTGGAAGTGCACCAGGACCCGCAGGGCTACCAGAGCGGCGTGGTGACGGCGGCGGCGGGCAAGCGCGCGTTCTTTCGCCAGCGGCGCGATACCGCCAAGGGCGCCCCCGAGGAATACATGGAAGGCGAGGCCGCGGAAATCGTCTGGGATGGACGCGCCGACACGGTCAGGCTCAAGCGCAGCGCCGAACTGCGGCGCCTGCGCGCGGGCGTGCTCACCGATGATGTGAGCGGCGCCCTGATCACCTACAACAACGCCACCGACGTCTTCACCGTCGACGGCGCGCCACGCCAGGCGGGGAACAAGACCGACGGCCGGGTGCGCGCCACGCTCGCGCCGAAGGAGACGCCGGCACCCGCCGCCGCAGGGCAGGCGGGCGCCCCGGCTCTGCGCACCAGCCCCGAACTCGGGCCGCCCCCGCAGTGA
PROTEIN sequence
Length: 209
MKHSSALLLVGALLLTVVSGVRAERADRDQPMHIEADSLLHDETTQTSVFTGNVVITKGTIVLRGGRVEVHQDPQGYQSGVVTAAAGKRAFFRQRRDTAKGAPEEYMEGEAAEIVWDGRADTVRLKRSAELRRLRAGVLTDDVSGALITYNNATDVFTVDGAPRQAGNKTDGRVRATLAPKETPAPAAAGQAGAPALRTSPELGPPPQ*