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scnpilot_solids1_trim150_scaffold_4093

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_4093_1
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..1006
DNA (1005bp) protein (335aa)
LysR family transcriptional regulator n=1 Tax=Acidovorax sp. NO-1 RepID=H0BRX4_9BURK
LysR family transcriptional regulator {ECO:0000313|EMBL:EHL24871.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
LysR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_4093_2
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1061..1390)
DNA (330bp) protein (110aa)
PsiF repeat-containing protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TVE6_ALIDB
PsiF repeat-containing protein {ECO:0000313|EMBL:GAO25380.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
psif repeat-containing protein
scnpilot_solids1_trim150_scaffold_4093_3
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1564..3243
DNA (1680bp) protein (560aa)
arginyl-tRNA synthetase (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19]
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
Arginine--tRNA ligase n=2 Tax=Alicycliphilus denitrificans RepID=E8TVE5_ALIDB
scnpilot_solids1_trim150_scaffold_4093_4
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3246..3914
DNA (669bp) protein (223aa)
sporulation protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI0003817DEE
Cell division protein {ECO:0000313|EMBL:GAD21845.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
sporulation-like protein
scnpilot_solids1_trim150_scaffold_4093_5
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3988..4641
DNA (654bp) protein (218aa)
Thiol:disulfide interchange protein n=2 Tax=Acidovorax RepID=A1W2X3_ACISJ rbh
dsba oxidoreductase; K03673 thiol:disulfide interchange protein DsbA rbh
Thiol:disulfide interchange protein {ECO:0000256|PIRNR:PIRNR001488}; Flags: Precursor;; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;"
scnpilot_solids1_trim150_scaffold_4093_6
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4775..5401
DNA (627bp) protein (209aa)
Lipopolysaccharide transport periplasmic protein LptA n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q5A2_ACIAP
Lipopolysaccharide export system protein LptA {ECO:0000256|HAMAP-Rule:MF_01914}; Flags: Precursor;; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
lipopolysaccharide transport periplasmic protein LptA; K09774 lipopolysaccharide export system protein LptA
scnpilot_solids1_trim150_scaffold_4093_7
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5407..7323
DNA (1917bp) protein (639aa)
RNA polymerase subunit sigma-54 n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036D1622
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
RNA polymerase sigma-54 subunit RpoN; K03092 RNA polymerase sigma-54 factor
scnpilot_solids1_trim150_scaffold_4093_8
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7388..7561
DNA (174bp) protein (58aa)
RNA polymerase sigma-54 subunit RpoN id=12553592 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
RNA polymerase sigma-54 subunit RpoN; K03092 RNA polymerase sigma-54 factor
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_solids1_trim150_scaffold_4093_9
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7620..8549)
DNA (930bp) protein (310aa)
aspartyl/asparaginyl beta-hydroxylase; K12979 beta-hydroxylase [EC:1.14.11.-] rbh
Aspartyl/asparaginyl beta-hydroxylase n=1 Tax=Comamonas testosteroni ATCC 11996 RepID=H1RWL8_COMTE rbh
Aspartyl/asparaginyl beta-hydroxylase {ECO:0000313|EMBL:EHN63255.1}; TaxID=1009852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni ATCC 11996.;"
scnpilot_solids1_trim150_scaffold_4093_10
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8642..8923
DNA (282bp) protein (94aa)
Putative RNA methylase n=1 Tax=Acidovorax sp. NO-1 RepID=H0C2R2_9BURK
RNA methylase
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
Displaying 10 items

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