ggKbase home page

scnpilot_solids1_trim150_scaffold_5389_5

Organism: SCNPILOT_SOLID_1_TRIM150_Burkholderiales_65_78

partial RP 29 / 55 MC: 1 BSCG 30 / 51 MC: 1 ASCG 10 / 38
Location: comp(4196..4549)

Top 3 Functional Annotations

Value Algorithm Source
Exported protein n=1 Tax=Herbaspirillum seropedicae (strain SmR1) RepID=D8IP13_HERSS similarity UNIREF
DB: UNIREF100
  • Identity: 43.2
  • Coverage: 111.0
  • Bit_score: 92
  • Evalue 2.90e-16
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 43.2
  • Coverage: 111.0
  • Bit_score: 92
  • Evalue 9.10e-17
Exported protein {ECO:0000313|EMBL:ADJ62833.1}; TaxID=757424 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum seropedicae (strain SmR1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.2
  • Coverage: 111.0
  • Bit_score: 92
  • Evalue 4.10e-16

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Herbaspirillum seropedicae → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 354
GTGAAGGCGCAGGAGGATGTCACGCTGTTCACGGCCGTGCCCGGCGCGGTCTATCTCAATGGCGGCATCGGTCAGGACGAGCAGATGAGCATGCGCAGGGACGCCAGCCACTGGCCGCTGCGCATGACGTTTTCGGACAAGGCGAACGACGAGTTCGTCGCCGATGTCGGACTCAAGGTGTTCGACGCCCATGGCCAGGCCGTCCTGCGCCTGAAGGACGCGGGCCCCATGACCTATGTGCAGCTACCCCAGGGCGAATACCACATCACCGCCAGCTACAGGGGCGACACGCTCACGCGCAACGTGCATGTCGGACCCAGGGGGCTGGACGCGAATTTTCACTGGGCCGGCTGA
PROTEIN sequence
Length: 118
VKAQEDVTLFTAVPGAVYLNGGIGQDEQMSMRRDASHWPLRMTFSDKANDEFVADVGLKVFDAHGQAVLRLKDAGPMTYVQLPQGEYHITASYRGDTLTRNVHVGPRGLDANFHWAG*