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scnpilot_solids1_trim150_scaffold_12

Search features with annotation key words

Displaying items 1-30 of 449 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_12_1
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

426..713
DNA (288bp) protein (96aa)
Transcriptional regulator n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K0C4_9MICO
DNA-binding protein HU {ECO:0000313|EMBL:KJL22083.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hup; bacterial nucleoid DNA-binding protein; K03530 DNA-binding protein HU-beta
scnpilot_solids1_trim150_scaffold_12_2
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

783..2810
DNA (2028bp) protein (676aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KCX6_9MICO rbh
Inner membrane protein YebZ {ECO:0000313|EMBL:KJL30183.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein; K02351 putative membrane protein; K07245 putative copper resistance protein D
scnpilot_solids1_trim150_scaffold_12_3
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2826..3947)
DNA (1122bp) protein (374aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000374C7E3 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL25071.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_12_4
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3969..5363
DNA (1395bp) protein (465aa)
ATP-dependent RecD-like DNA helicase {ECO:0000313|EMBL:KJL22786.1}; EC=3.6.4.12 {ECO:0000313|EMBL:KJL22786.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
helicase n=1 Tax=Microbacterium barkeri RepID=UPI0002E5AD0A rbh
ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member rbh
scnpilot_solids1_trim150_scaffold_12_5
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5427..6713
DNA (1287bp) protein (429aa)
beta-lactamase class C and other penicillin binding proteins; K01286 D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00030B8CC3 rbh
Beta-lactamase {ECO:0000313|EMBL:KDA05056.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
scnpilot_solids1_trim150_scaffold_12_6
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6740..7330
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003464F27
Uncharacterized protein {ECO:0000313|EMBL:KJL20126.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
Na+-driven multidrug efflux pump
scnpilot_solids1_trim150_scaffold_12_7
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7448..8020
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003629245
Copper resistance protein CopC {ECO:0000313|EMBL:EYT59146.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
hypothetical protein; K07156
scnpilot_solids1_trim150_scaffold_12_8
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8078..9094
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000316BE71 rbh
Magnesium transport protein CorA {ECO:0000256|RuleBase:RU362010}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
corA1; putative Mg2+/Co2+ transporter, MIT family rbh
scnpilot_solids1_trim150_scaffold_12_9
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9095..10162)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RA26_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL33956.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_12_10
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10245..11210
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000376FDF1 rbh
Uncharacterized protein {ECO:0000313|EMBL:KHK95876.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
LysR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_12_11
Nocardioides luteus, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11333..14137
DNA (2805bp) protein (935aa)
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00036B519A rbh
Oxidoreductase {ECO:0000313|EMBL:KJR12558.1}; TaxID=1844 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides luteus.;"
FAD linked oxidase domain-containing protein rbh
scnpilot_solids1_trim150_scaffold_12_12
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14244..15476
DNA (1233bp) protein (411aa)
Threonine synthase {ECO:0000313|EMBL:EOD57703.1}; EC=4.2.3.1 {ECO:0000313|EMBL:EOD57703.1};; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
threonine synthase n=1 Tax=Glaciibacter superstes RepID=UPI0003B51501 rbh
thrC; threonine synthase
scnpilot_solids1_trim150_scaffold_12_13
Streptomyces sp. AcH 505, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15499..16188
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B542A7
Uncharacterized protein {ECO:0000313|EMBL:KIF72496.1}; TaxID=352211 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AcH 505.;"
GntR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_12_14
Arthrobacter siccitolerans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16332..17492
DNA (1161bp) protein (387aa)
oxidoreductase n=1 Tax=Arthrobacter sp. 135MFCol5.1 RepID=UPI000366DC66 rbh
Oxidoreductase , NAD-binding Rossmann fold family protein {ECO:0000313|EMBL:CCQ47272.1}; TaxID=861266 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter siccitolerans.;"
dehydrogenase rbh
scnpilot_solids1_trim150_scaffold_12_15
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17489..18730
DNA (1242bp) protein (414aa)
sugar isomerase n=1 Tax=Ruania albidiflava RepID=UPI0003B789ED rbh
putative sugar isomerase rbh
Putative sugar isomerase {ECO:0000313|EMBL:BAK35162.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
scnpilot_solids1_trim150_scaffold_12_16
Arthrobacter phenanthrenivorans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18727..19674
DNA (948bp) protein (316aa)
ribokinase n=1 Tax=Ruania albidiflava RepID=UPI0003B59D1E rbh
sugar kinase
Sugar kinase, ribokinase {ECO:0000313|EMBL:ADX72133.1}; Flags: Precursor;; TaxID=930171 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG; 23796 / Sphe3).;"
scnpilot_solids1_trim150_scaffold_12_17
Arthrobacter sp. FB24, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19689..20573
DNA (885bp) protein (295aa)
Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Arthrobacter sp. (strain FB24) RepID=A0JWB0_ARTS2 rbh
deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase rbh
Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000313|EMBL:ABK03330.1}; TaxID=290399 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. (strain FB24).;"
scnpilot_solids1_trim150_scaffold_12_18
Arthrobacter phenanthrenivorans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20614..21933
DNA (1320bp) protein (440aa)
ABC transporter substrate-binding protein n=1 Tax=Ruania albidiflava RepID=UPI0003B35E02 rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIC67659.1}; TaxID=361575 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter phenanthrenivorans.;"
carbohydrate ABC transporter substrate-binding protein; K02027 multiple sugar transport system substrate-binding protein rbh
scnpilot_solids1_trim150_scaffold_12_19
Arthrobacter sp. FB24, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21938..22876
DNA (939bp) protein (313aa)
ABC transporter permease n=1 Tax=Ruania albidiflava RepID=UPI0003B3926E rbh
binding-protein-dependent transport system inner membrane protein; K02025 multiple sugar transport system permease protein rbh
Carbohydrate ABC transporter membrane protein 1, CUT1 family {ECO:0000313|EMBL:ABK03328.1}; TaxID=290399 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. (strain FB24).;"
scnpilot_solids1_trim150_scaffold_12_20
Arthrobacter sp. FB24, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22873..23688
DNA (816bp) protein (272aa)
ABC transporter permease n=1 Tax=Ruania albidiflava RepID=UPI0003B45D62 rbh
binding-protein-dependent transport system inner membrane protein; K02026 multiple sugar transport system permease protein rbh
Carbohydrate ABC transporter membrane protein 2, CUT1 family {ECO:0000313|EMBL:ABK03327.1}; TaxID=290399 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. (strain FB24).;"
scnpilot_solids1_trim150_scaffold_12_21
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23718..25142
DNA (1425bp) protein (475aa)
succinate semialdehyde dehydrogenase; K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16] rbh
succinate-semialdehyde dehdyrogenase n=1 Tax=Ruania albidiflava RepID=UPI0003B2EC0A rbh
Succinate-semialdehyde dehydrogenase {ECO:0000313|EMBL:KJK11478.1}; TaxID=1619947 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
scnpilot_solids1_trim150_scaffold_12_22
Arthrobacter arilaitensis, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25213..25914
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Ruania albidiflava RepID=UPI0003B67611
hypothetical protein; K07090
Conserved hypothetical membrane protein {ECO:0000313|EMBL:CBT77273.1}; TaxID=861360 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter arilaitensis (strain DSM 16368 / CIP 108037 / JCM 13566 /; Re117).;"
scnpilot_solids1_trim150_scaffold_12_23
Arthrobacter siccitolerans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25999..26775
DNA (777bp) protein (259aa)
DeoR family transcripitonal regulator n=1 Tax=Ruania albidiflava RepID=UPI0003B71311
DeoR family transcriptional regulator
DeoR-like helix-turn-helix domain protein {ECO:0000313|EMBL:CCQ47271.1}; TaxID=861266 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter siccitolerans.;"
scnpilot_solids1_trim150_scaffold_12_24
Arthrobacter arilaitensis, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26768..27556
DNA (789bp) protein (263aa)
aspartate dehydrogenase (EC:1.4.1.21); K06989 aspartate dehydrogenase [EC:1.4.1.21]
Putative aspartate dehydrogenase {ECO:0000313|EMBL:CBT74668.1}; EC=1.4.1.21 {ECO:0000313|EMBL:CBT74668.1};; TaxID=861360 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter arilaitensis (strain DSM 16368 / CIP 108037 / JCM 13566 /; Re117).;"
hypothetical protein n=1 Tax=Nocardiopsis salina RepID=UPI0003454631
scnpilot_solids1_trim150_scaffold_12_25
Sanguibacter keddieii, Sanguibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27603..28178)
DNA (576bp) protein (192aa)
Predicted dinucleotide-binding enzyme n=1 Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BI46_SANKS
dinucleotide-binding protein; K06988
Predicted dinucleotide-binding enzyme {ECO:0000313|EMBL:ACZ20020.1}; TaxID=446469 species="Bacteria; Actinobacteria; Micrococcales; Sanguibacteraceae; Sanguibacter.;" source="Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 /; ST-74).;"
scnpilot_solids1_trim150_scaffold_12_26
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28317..28748
DNA (432bp) protein (144aa)
Transcriptional regulator, MarR family n=1 Tax=Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 / JCM 7437 / NCTC 10488) RepID=D7AY31_NOCDD
MarR-family transcriptional regulator {ECO:0000313|EMBL:EWM10306.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
MarR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_12_27
Terrabacter sp. 28, Terrabacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28732..29190)
DNA (459bp) protein (153aa)
phage tail protein n=1 Tax=Curtobacterium sp. B8 RepID=UPI0003471C8C
Phage tail protein {ECO:0000313|EMBL:KJK12786.1}; TaxID=1619947 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Terrabacter.;" source="Terrabacter sp. 28.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_12_28
Cellulomonas cellasea, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29274..29693
DNA (420bp) protein (140aa)
lysine transporter LysE n=1 Tax=Citricoccus sp. CH26A RepID=UPI000255F4B1
Uncharacterized protein {ECO:0000313|EMBL:KGM03603.1}; TaxID=1408250 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas cellasea DSM 20118.;"
RHBT family amino acid transporter
scnpilot_solids1_trim150_scaffold_12_29

Not on your lists

comp(29720..30190)
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E5F64E
ASCH domain {ECO:0000313|EMBL:AGU11931.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
ASCH domain-containing protein
scnpilot_solids1_trim150_scaffold_12_trna_2
unknown

Not on your lists

comp(30193..30263)
DNA (71bp)
transferRNA Gly
Displaying items 1-30 of 449 in total

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