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scnpilot_solids1_trim150_scaffold_39

Search features with annotation key words

Displaying items 1-30 of 360 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_39_1
unknown

Not on your lists

1..231
DNA (231bp) protein (77aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_39_2
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(982..1875)
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00036C2DE8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH88987.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
scnpilot_solids1_trim150_scaffold_39_3
unknown

Not on your lists

comp(1872..2090)
DNA (219bp) protein (73aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI0003753F3B
scnpilot_solids1_trim150_scaffold_39_4
Arthrobacter sp. AK-YN10, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2090..2527)
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI0003819C6A
Uncharacterized protein {ECO:0000313|EMBL:ERI35209.1}; TaxID=1349820 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. AK-YN10.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_39_5
Arthrobacter sp. FB24, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2537..3931)
DNA (1395bp) protein (465aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00035FE182 rbh
ATPase central domain-containing protein rbh
AAA ATPase, central domain protein {ECO:0000313|EMBL:ABK02417.1}; TaxID=290399 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. (strain FB24).;"
scnpilot_solids1_trim150_scaffold_39_6
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4295..5158)
DNA (864bp) protein (288aa)
Formyltetrahydrofolate deformylase {ECO:0000256|HAMAP-Rule:MF_01927}; EC=3.5.1.10 {ECO:0000256|HAMAP-Rule:MF_01927};; Formyl-FH(4) hydrolase {ECO:0000256|HAMAP-Rule:MF_01927}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
formyltetrahydrofolate deformylase (EC:3.5.1.10) rbh
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000344B903 rbh
scnpilot_solids1_trim150_scaffold_39_7
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

5230..5685
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003463B6C
glutaminase
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_39_8
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5686..6399)
DNA (714bp) protein (238aa)
GMP synthase - glutamine amidotransferase domain; K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00030C5B93
Contig_15, whole genome shotgun sequence {ECO:0000313|EMBL:KIP92176.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
scnpilot_solids1_trim150_scaffold_39_9
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6501..9047
DNA (2547bp) protein (849aa)
ATPase AAA n=1 Tax=Agromyces subbeticus RepID=UPI0003B65A8C rbh
ATP-dependent Clp protease ATP-binding subunit ClpC {ECO:0000313|EMBL:KJL25374.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
ATPase with chaperone activity, ATP-binding subunit; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC rbh
scnpilot_solids1_trim150_scaffold_39_10
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9119..9835)
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002FB0B4B
Transcriptional regulator {ECO:0000313|EMBL:KDA07006.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
transcriptional regulator
scnpilot_solids1_trim150_scaffold_39_11
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10033..10713)
DNA (681bp) protein (227aa)
Putative transcriptional regulator n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SM19_NOCSJ
Uncharacterized protein {ECO:0000313|EMBL:CCH77283.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
putative transcriptional regulator
scnpilot_solids1_trim150_scaffold_39_12
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10804..11232
DNA (429bp) protein (143aa)
PROBABLE TRANSMEMBRANE PROTEIN n=1 Tax=Rhodococcus sp. EsD8 RepID=N1MFV8_9NOCA
Uncharacterized protein {ECO:0000313|EMBL:KJL32409.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
DoxX family protein
scnpilot_solids1_trim150_scaffold_39_13
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11416..11847
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KTT9_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EQM83434.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_39_14
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11866..12273)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KEN0_9MICO
Transferase {ECO:0000313|EMBL:KDA07009.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
scnpilot_solids1_trim150_scaffold_39_15
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12366..13139)
DNA (774bp) protein (258aa)
formamidopyrimidine-DNA glycosylase; K05522 endonuclease VIII [EC:3.2.2.- 4.2.99.18] rbh
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000348E92B rbh
DNA glycosylase {ECO:0000313|EMBL:EYT60105.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
scnpilot_solids1_trim150_scaffold_39_16
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13132..13875)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KBX9_9MICO
Protein CysZ {ECO:0000313|EMBL:KJL32412.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein; K06203 CysZ protein
scnpilot_solids1_trim150_scaffold_39_17
Gordonia amarae, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13967..14680
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003488841 rbh
Putative uncharacterized protein {ECO:0000313|EMBL:GAB05640.1}; TaxID=1075090 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia amarae NBRC 15530.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_39_18
Gordonia amarae, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14694..15152
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034C3782
Putative DNA-binding protein {ECO:0000313|EMBL:GAB05639.1}; TaxID=1075090 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia amarae NBRC 15530.;"
putative DNA-binding protein
scnpilot_solids1_trim150_scaffold_39_19
unknown

Not on your lists

comp(15255..15575)
DNA (321bp) protein (107aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_39_20
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15603..15869)
DNA (267bp) protein (89aa)
Toxin YoeB {ECO:0000313|EMBL:KJQ53997.1}; EC=3.1.-.- {ECO:0000313|EMBL:KJQ53997.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
toxin-antitoxin system, toxin component, Txe/YoeB family n=1 Tax=Arthrobacter sp. PAO19 RepID=UPI0003B655E7
hypothetical protein
scnpilot_solids1_trim150_scaffold_39_21
Agreia bicolorata, Agreia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15866..16114)
DNA (249bp) protein (83aa)
antitoxin n=1 Tax=Arthrobacter sp. PAO19 RepID=UPI0003B4C21E
Antitoxin {ECO:0000313|EMBL:KJC63122.1}; TaxID=110935 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agreia.;" source="Agreia bicolorata.;"
prevent-host-death family protein
scnpilot_solids1_trim150_scaffold_39_22
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16173..20780)
DNA (4608bp) protein (1536aa)
Lhr-like helicase; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] rbh
DEAD/DEAH box helicase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000349401F rbh
Contig_11, whole genome shotgun sequence {ECO:0000313|EMBL:KIP92944.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
scnpilot_solids1_trim150_scaffold_39_23
Arthrobacter sp. PAMC25486, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20915..23539
DNA (2625bp) protein (875aa)
Brp/Blh family beta-carotene 15,15'-monooxygenase n=1 Tax=Actinomyces sp. oral taxon 448 str. F0400 RepID=F9EEV6_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:AIY02304.1}; TaxID=1494608 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. PAMC25486.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_39_24
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23590..24000
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Propionibacterium acidipropionici (strain ATCC 4875 / DSM 20272 / JCM 6432 / NBRC 12425 / NCIMB 8070) RepID=K7S651_PROA4
Uncharacterized protein {ECO:0000313|EMBL:KJL20545.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_39_25
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24004..25668)
DNA (1665bp) protein (555aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KBX5_9MICO rbh
Putative ABC transporter ATP-binding protein YheS {ECO:0000313|EMBL:KJL32417.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
ATPase components of ABC transporters with duplicated ATPase domains rbh
scnpilot_solids1_trim150_scaffold_39_26
unknown

Not on your lists

25990..26226
DNA (237bp) protein (79aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_39_27
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26217..26870)
DNA (654bp) protein (218aa)
Carboxylesterase 2 {ECO:0000313|EMBL:KJL20551.1}; EC=3.1.1.1 {ECO:0000313|EMBL:KJL20551.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00036D17C8 rbh
esterase; K06999 phospholipase/carboxylesterase
scnpilot_solids1_trim150_scaffold_39_28
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26938..27525
DNA (588bp) protein (196aa)
ADP-ribose pyrophosphatase n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003711C32
Uncharacterized protein {ECO:0000313|EMBL:KJL25362.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
SAM-dependent methyltransferase
scnpilot_solids1_trim150_scaffold_39_29
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27693..28760)
DNA (1068bp) protein (356aa)
threonine aldolase; K01620 threonine aldolase [EC:4.1.2.5] rbh
threonine aldolase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034BF4FB rbh
Contig_11, whole genome shotgun sequence {ECO:0000313|EMBL:KIP92947.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
scnpilot_solids1_trim150_scaffold_39_30
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28926..29579
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Arthrobacter sp. M2012083 RepID=UPI00035C8079
Uncharacterized protein {ECO:0000313|EMBL:KJL36997.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
Displaying items 1-30 of 360 in total

View Taxonomy