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scnpilot_solids1_trim150_scaffold_67

Search features with annotation key words

Displaying items 91-115 of 115 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_67_91
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

93233..94024
DNA (792bp) protein (264aa)
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE {ECO:0000313|EMBL:KJQ53748.1}; EC=2.1.1.163 {ECO:0000313|EMBL:KJQ53748.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KPX5_9MICO rbh
putative ubiquinone/menaquinone methyltransferase rbh
scnpilot_solids1_trim150_scaffold_67_92
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

94184..95386
DNA (1203bp) protein (401aa)
Sensor histidine kinase DesK {ECO:0000313|EMBL:KJL29210.1}; EC=2.7.13.3 {ECO:0000313|EMBL:KJL29210.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KDZ0_9MICO rbh
signal transduction histidine kinase rbh
scnpilot_solids1_trim150_scaffold_67_93
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

95476..96111
DNA (636bp) protein (212aa)
LuxR family transcriptional regulator n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KP73_9MICO rbh
LuxR family transcriptional regulator {ECO:0000313|EMBL:EQM81839.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain rbh
scnpilot_solids1_trim150_scaffold_67_94
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

96197..96958
DNA (762bp) protein (254aa)
ABC transporter n=1 Tax=Microbacterium barkeri RepID=UPI0002EB05F9 rbh
ABC transporter ATP-binding protein YxdL {ECO:0000313|EMBL:KJQ53745.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
ABC transporter; K02003 putative ABC transport system ATP-binding protein rbh
scnpilot_solids1_trim150_scaffold_67_95
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

96955..98424
DNA (1470bp) protein (490aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KU04_9MICO rbh
ABC transporter permease YtrF {ECO:0000313|EMBL:KJL21176.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein; K02004 putative ABC transport system permease protein
scnpilot_solids1_trim150_scaffold_67_96
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

98556..99218
DNA (663bp) protein (221aa)
2-phosphosulfolactate phosphatase {ECO:0000256|SAAS:SAAS00085834}; EC=3.1.3.71 {ECO:0000256|SAAS:SAAS00085834};; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KS49_9MICO
phosphosulfolactate phosphohydrolase
scnpilot_solids1_trim150_scaffold_67_97
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

99275..99649
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002EE6F70
Uncharacterized protein {ECO:0000313|EMBL:EQM81842.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_67_98
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(99673..100161)
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000376047D
SprT-like family protein {ECO:0000313|EMBL:KJQ53741.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
metal-dependent hydrolase
scnpilot_solids1_trim150_scaffold_67_99
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(100196..100726)
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002DE45F9
Uncharacterized protein {ECO:0000313|EMBL:KJL19069.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
TPR repeat
scnpilot_solids1_trim150_scaffold_67_100
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(100794..101663)
DNA (870bp) protein (290aa)
spermidine synthase n=1 Tax=Microbacterium barkeri RepID=UPI0002F7F07F rbh
Contig_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIP92656.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
spermidine synthase rbh
scnpilot_solids1_trim150_scaffold_67_101
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

101899..105399
DNA (3501bp) protein (1167aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
rpoB; DNA-directed RNA polymerase, beta subunit/140 kD subunit; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] rbh
DNA-directed RNA polymerase subunit beta n=1 Tax=Microbacterium barkeri RepID=UPI00030D6C83 rbh
scnpilot_solids1_trim150_scaffold_67_102
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

105445..109311
DNA (3867bp) protein (1289aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
rpoC; DNA-directed RNA polymerase, beta' subunit/160 kD subunit; K03046 DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] rbh
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Microbacterium barkeri RepID=UPI0002E152F6 rbh
scnpilot_solids1_trim150_scaffold_67_103
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(109479..110222)
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003496866
Uncharacterized protein {ECO:0000313|EMBL:KJQ53721.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
glutamine cyclotransferase
scnpilot_solids1_trim150_scaffold_67_104
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

110233..111111
DNA (879bp) protein (293aa)
2-dehydro-3-deoxygluconokinase {ECO:0000313|EMBL:KJQ53720.1}; EC=2.7.1.45 {ECO:0000313|EMBL:KJQ53720.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
carbohydrate kinase; K00847 fructokinase [EC:2.7.1.4]
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002F7FAD6 rbh
scnpilot_solids1_trim150_scaffold_67_trna_1
unknown

Not on your lists

comp(111166..111246)
DNA (81bp)
transferRNA Tyr
scnpilot_solids1_trim150_scaffold_67_105
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(111357..111701)
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000371915C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ75498.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_solids1_trim150_scaffold_67_106
Sinomonas sp. MUSC 117, Sinomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(111839..112600)
DNA (762bp) protein (254aa)
Putative amidohydrolase n=1 Tax=Arthrobacter phenanthrenivorans (strain DSM 18606 / JCM 16027 / LMG 23796 / Sphe3) RepID=F0M3H3_ARTPP
Amidohydrolase {ECO:0000313|EMBL:KHL04327.1}; TaxID=1338436 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Sinomonas.;" source="Sinomonas sp. MUSC 117.;"
amidohydrolase
scnpilot_solids1_trim150_scaffold_67_107
Arthrobacter siccitolerans, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(112605..113984)
DNA (1380bp) protein (460aa)
Putative amino acid transporter n=1 Tax=Arthrobacter globiformis NBRC 12137 RepID=H0QQL5_ARTGO rbh
Amino acid permease family protein {ECO:0000313|EMBL:CCQ47193.1}; TaxID=861266 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter siccitolerans.;"
amino acid transporter rbh
scnpilot_solids1_trim150_scaffold_67_108
Mycobacterium mageritense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(114018..114899)
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Pseudoclavibacter faecalis RepID=UPI0003670599
Formamidase {ECO:0000313|EMBL:CDO25714.1}; TaxID=53462 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium mageritense.;"
hydrolase
scnpilot_solids1_trim150_scaffold_67_109
Mycobacterium setense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

114996..115736
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2MSJ2_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KHO20717.1}; TaxID=431269 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium setense.;"
GntR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_67_110
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(115853..116167)
DNA (315bp) protein (105aa)
Uncharacterized conserved protein n=1 Tax=Brachybacterium faecium (strain ATCC 43885 / DSM 4810 / NCIB 9860) RepID=C7MEX2_BRAFD
Uncharacterized protein {ECO:0000313|EMBL:KDA04850.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_67_111
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

116279..116845
DNA (567bp) protein (189aa)
Predicted transcriptional regulator n=1 Tax=Brachybacterium faecium (strain ATCC 43885 / DSM 4810 / NCIB 9860) RepID=C7MEX1_BRAFD
Uncharacterized protein {ECO:0000313|EMBL:KDA04851.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
putative transcriptional regulator
scnpilot_solids1_trim150_scaffold_67_112
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

116842..118152
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Arthrobacter gangotriensis Lz1y RepID=M7MUV6_9MICC rbh
Uncharacterized protein {ECO:0000313|EMBL:KDA04851.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_67_113
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

118149..120863
DNA (2715bp) protein (905aa)
hypothetical protein; K00368 nitrite reductase (NO-forming) [EC:1.7.2.1] rbh
Multicopper oxidase family protein n=1 Tax=Arthrobacter gangotriensis Lz1y RepID=M7NAA9_9MICC rbh
Multicopper oxidase {ECO:0000313|EMBL:KDA04852.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
scnpilot_solids1_trim150_scaffold_67_114
unknown

Not on your lists

comp(121135..121212)
DNA (78bp) protein (26aa)

This feature has no annotations

Displaying items 91-115 of 115 in total

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