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scnpilot_solids1_trim150_scaffold_67_101

Organism: SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 101899..105399

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.8
  • Coverage: 999.99
  • Bit_score: 2149
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase, beta subunit/140 kD subunit; K03043 DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 88.8
  • Coverage: 999.99
  • Bit_score: 2047
  • Evalue 0.0
  • rbh
DNA-directed RNA polymerase subunit beta n=1 Tax=Microbacterium barkeri RepID=UPI00030D6C83 similarity UNIREF
DB: UNIREF100
  • Identity: 93.1
  • Coverage: 999.99
  • Bit_score: 2150
  • Evalue 0.0
  • rbh

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Taxonomy

Microbacterium sp. UCD-TDU → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3501
TTGGCTGCTGCTCGCAACGCATCCACATCCACCACCAAGAAGAACGGCCGCGGAGTCTCCCGCCTCTCGTTCGCCAAGATCTCCGACACGTTGGCTGTCCCTGATCTGCTGGCAATCCAGACCGAGTCGTTCGGCTGGCTCGTCGGCAACGACAGCTGGAAGGCCCGTGCGGCCGAGGCCAAGAAGGCCGGACGCAACGACGTCCCGCAGGTCTCCGGCCTCGGTGAGATCTTCGAGGAGATCTCCCCCATCGAGGACCTGGGCGAGACCATGCAGCTCTCGTTCACGAACCCGTACCTCGAGCCCGAGAAGTACTCGATCGACGAGTGCAAGGAGCGCGGCAAGACGTACGCCGCCCCGCTGTACGTCGAGGCCGAGTTCATGAACCACCTCACCGGTGAGATCAAGACCCAGACGGTCTTCATGGGCGACTTCCCGCTGCAGACCGACAAGGGCACGTTCATCATCAACGGCTCCGAGCGCGTCGTCGTCTCGCAGCTGGTGCGCTCGCCCGGCGTGTACTTCGACAAGACGCCCGACAAGACCAGTGACAAGGACATCGTCACCGCCCGCGTCATCCCGTCGCGCGGCGCCTGGCTCGAGTTCGAGGTCGACAAGCGCGACCAGGTCGGCGTGCGCATCGACCGCAAGCGCAAGCAGTCCGTCACGGTCTTCCTGAAGGCCCTCGGCATGACCAGCGAGGAGATCCTCGCCGAGTTCGCCGGCTTCCCCTCCATCGAGGACACGCTGTCCAAGGACACCATCCTCACCAAGGAGGACGCGCTCCGCGACATCTACCGCAAGCTGCGTCCGGGCGAGCAGGTCGCCGCCGAGGCCGCCCGCGCGCTGCTGGACAACTTCTACTTCAACCCGAAGCGCTACGACCTGGCCAAGGTCGGTCGTTACAAGATCAACCAGAAGCTCGGCCTGGCCGGCGCTCTGACCGACTCGGTGCTGACCGTCGAGGACATCGTCGCGACCATCAAGTACATGGTGCGCCTGCACCGCGGTGACGAGTCGTTCGAGGGCATCCGCTCGGGCAAGAAGGCCGAGATCCGCATCGCGACCGACGACATCGACAACTTCGGCAACCGCCGAATCCGCGCCGTCGGCGAGCTCATCCAGAACCAGGTCCGCACGGGCCTCTCCCGCATGGAGCGCGTCGTCCGCGAGCGCATGACCACGCAGGACATCGAGGCGATCACCCCGCAGACCCTGATCAACGTGCGCCCCGTCGTGGCCGCGATCAAGGAGTTCTTCGGCACCTCGCAGCTGTCGCAGTTCATGGACCAGAACAACCCGCTCGCGGGTCTGACCAACAAGCGCCGTCTGTCGGCCCTGGGCCCCGGTGGCCTCAGCCGCGACCGCGCCGGCGTCGAGGTCCGCGACGTGCACCCGTCGCACTACGGCCGCATGTGCCCGATCGAGACGCCTGAAGGCCCGAACATCGGTCTGATCGGCGCGCTCGCGACGTTCGCGCGCATCAACTCGTTCGGCTTCATCGAGACCCCGTACCGCAAGGTCGAGGGCGGCAAGGTCACCGACCAGATCGACTACCTCAGCGCCGCTGAGGAGGCCGACTTCAACATCGCCCAGGCCAACGCGCCGCTGGCCGCCGACGGCCGCTTCACCGAGACCCACGTGCTGGCCCGCCCCCGCGGCGGATCGGGCGAGGTCGACCTGTTCCTGCCCGAGGAGATCGGCTACATCGACGTCTCGCCGCGCCAGATGGTGTCGGTCGCGACCTCGCTGGTGCCGTTCCTCGAACACGACGACGCGCAGCGCGCGCTCATGGGCGCCAACATGCAGCGCCAGGCCGTGCCGCTGCTGCGCAGCGACTCCCCGCTGGTCGGAACCGGTATGGAGGGCTACACCGCCATCGACGCCGGCGACGTGGTCACCGCGCTGAAGGCCGGTGTGGTCAGTGAGGTCTCCGCGGACCGCGTGGTCGTCATGCTCGACGAGGGCGGCACGCAGGAGTACCACCTGCGCAAGTTCGACCGCTCCAACCAGGGCACGTCCTACAACCAGCGCGTGATCGTCAACGCCGGTGAGCGCGTGGAGGTCGGCGAGGTCATCGCCGACGGCCCCGCCACCGACAACGGCGAGCTCGCACTCGGCAAGAACCTGCTGGTCGCGTTCATGCCGTGGGAGGGCCACAACTACGAGGACGCCATCGTCCTGAGCCAGGAGATCGTGAAGGACGACACCCTCTCCTCGATCCACATCGAGGAGTACGAGGTCGACGCCCGCGACACCAAGCTGGGCAAGGAGGAGATCACCCGTGACCTCCCCAACGTCAGCCCCGAGCTGCTGAAGGACCTCGACGAGCGCGGCATCATCCGCATCGGCGCCGAGGTCCGCCCCGGCGACATCCTGGTCGGCAAGGTCACCCCGAAGGGCGAGACCGAGCTCTCGGCCGAGGAGCGCCTGCTGCGCGCCATCTTCAACGAGAAGAGCCGTGAGGTCCGCGACACCTCGCTGAAGGTGCCGCACGGCGAGCAGGGCACGATCATCGCCGTCAAGGAGTTCAACGCCGAGGAGGGCGACGACGAGCTGGGCTCGGGCGTCAACCGCCGCGTCGTGGTCTACATCGCCCAGAAGCGCAAGATCACCGAGGGCGACAAGCTCTCCGGCCGCCACGGCAACAAGGGCGTCATCGCCAAGATCCTGCCGGTCGAGGACATGCCGTTCCTCTCCGACGGAACCCCGGTCGACGTGGTCCTGAACCCGCTCGGCATCCCGGGCCGCATGAACTTCGGCCAGGTGCTGGAGACCCACCTCGGGTGGATCGCCAAGCAGGGCTGGAAGGTCGAGGGCAACCCGGAGTGGGCCGCCAAGCTGGCCGACGACGCCCGTGACGTCGCCCCGAACACCAAGGTCGCCACCCCGGTGTTCGACGGTGCGAGCGTCGACGAGGTCGCAGGGCTCCTGGACTCCACCCGGGTGACCCGCGACGGCGTGCGCCTGGTCGACCGCACCGGCAAGACCCAGCTGTTCGACGGCCGCTCCGGCGAGCCGTTCCCGGACCCGGTGTCGGTCGGCTACATGTACATCCTGAAGCTGCACCACCTGGTGGACGACAAGATCCACGCACGCTCCACGGGCCCGTACTCGATGATCACCCAGCAGCCGCTCGGTGGTAAGGCCCAGTTCGGTGGTCAGCGCTTCGGCGAGATGGAGGTGTGGGCCCTCGAGGCCTACGGCGCCGCCTACGCACTGCAGGAGCTCCTCACCATCAAGTCCGACGACATCCTCGGCCGCGTCAAGGTGTACGAGGCCATCGTCAAGGGCGAGAACATCCAGGAGCCGGGCATCCCCGAGTCCTTCAAGGTGCTCATGAAGGAGATGCAGTCGCTGTGCCTGAACGTCGAGGTGCTCTCGGCCGACGGCACCGCGGTGAACCTCCGCGACACCGATGACGAGGCCTTCCGTGCGGCGGAGGAACTCGGCATCAACATCTCCAGCCGCTTCGAAGCCGCATCGATCGACGAGATCTGA
PROTEIN sequence
Length: 1167
LAAARNASTSTTKKNGRGVSRLSFAKISDTLAVPDLLAIQTESFGWLVGNDSWKARAAEAKKAGRNDVPQVSGLGEIFEEISPIEDLGETMQLSFTNPYLEPEKYSIDECKERGKTYAAPLYVEAEFMNHLTGEIKTQTVFMGDFPLQTDKGTFIINGSERVVVSQLVRSPGVYFDKTPDKTSDKDIVTARVIPSRGAWLEFEVDKRDQVGVRIDRKRKQSVTVFLKALGMTSEEILAEFAGFPSIEDTLSKDTILTKEDALRDIYRKLRPGEQVAAEAARALLDNFYFNPKRYDLAKVGRYKINQKLGLAGALTDSVLTVEDIVATIKYMVRLHRGDESFEGIRSGKKAEIRIATDDIDNFGNRRIRAVGELIQNQVRTGLSRMERVVRERMTTQDIEAITPQTLINVRPVVAAIKEFFGTSQLSQFMDQNNPLAGLTNKRRLSALGPGGLSRDRAGVEVRDVHPSHYGRMCPIETPEGPNIGLIGALATFARINSFGFIETPYRKVEGGKVTDQIDYLSAAEEADFNIAQANAPLAADGRFTETHVLARPRGGSGEVDLFLPEEIGYIDVSPRQMVSVATSLVPFLEHDDAQRALMGANMQRQAVPLLRSDSPLVGTGMEGYTAIDAGDVVTALKAGVVSEVSADRVVVMLDEGGTQEYHLRKFDRSNQGTSYNQRVIVNAGERVEVGEVIADGPATDNGELALGKNLLVAFMPWEGHNYEDAIVLSQEIVKDDTLSSIHIEEYEVDARDTKLGKEEITRDLPNVSPELLKDLDERGIIRIGAEVRPGDILVGKVTPKGETELSAEERLLRAIFNEKSREVRDTSLKVPHGEQGTIIAVKEFNAEEGDDELGSGVNRRVVVYIAQKRKITEGDKLSGRHGNKGVIAKILPVEDMPFLSDGTPVDVVLNPLGIPGRMNFGQVLETHLGWIAKQGWKVEGNPEWAAKLADDARDVAPNTKVATPVFDGASVDEVAGLLDSTRVTRDGVRLVDRTGKTQLFDGRSGEPFPDPVSVGYMYILKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSDDILGRVKVYEAIVKGENIQEPGIPESFKVLMKEMQSLCLNVEVLSADGTAVNLRDTDDEAFRAAEELGINISSRFEAASIDEI*