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scnpilot_solids1_trim150_scaffold_68

Search features with annotation key words

Displaying items 31-60 of 119 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_68_31
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30423..31214)
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034734ED rbh
Uncharacterized protein {ECO:0000313|EMBL:KDA06087.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_68_32
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31198..31944)
DNA (747bp) protein (249aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
priA; phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase; K01814 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]; K01817 phosphoribosylanthranilate isomerase [EC:5.3.1.24] rbh
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KKZ1_9MICO rbh
scnpilot_solids1_trim150_scaffold_68_33
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32041..32676)
DNA (636bp) protein (212aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hisH; Imidazole glycerol phosphate synthase subunit (EC:2.4.2.-) rbh
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034BBC1B rbh
scnpilot_solids1_trim150_scaffold_68_34
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32673..33290)
DNA (618bp) protein (206aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hisB; imidazoleglycerol-phosphate dehydratase; K01693 imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
imidazoleglycerol-phosphate dehydratase n=1 Tax=Microbacterium barkeri RepID=UPI00030F10C5 rbh
scnpilot_solids1_trim150_scaffold_68_35
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33287..34378)
DNA (1092bp) protein (364aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hisC1; histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; K00817 histidinol-phosphate aminotransferase [EC:2.6.1.9] rbh
aspartate aminotransferase n=1 Tax=Microbacterium barkeri RepID=UPI0003781E5F rbh
scnpilot_solids1_trim150_scaffold_68_36
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34419..34811)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00031A3201
Cell division suppressor protein YneA {ECO:0000313|EMBL:KJL29003.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
conserved secreted protein
scnpilot_solids1_trim150_scaffold_68_37
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35115..35801
DNA (687bp) protein (229aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008054};; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
lexA; SOS-response transcriptional repressors; K01356 repressor LexA [EC:3.4.21.88] rbh
LexA repressor n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KMU4_9MICO rbh
scnpilot_solids1_trim150_scaffold_68_38
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35893..38205)
DNA (2313bp) protein (771aa)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase {ECO:0000256|SAAS:SAAS00049969}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00277956};; EC=2.1.1.14 {ECO:0000256|SAAS:SAAS00050077};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037971A0 rbh
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_68_39
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38217..39161)
DNA (945bp) protein (315aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI00035E31DB rbh
secreted protein rbh
scnpilot_solids1_trim150_scaffold_68_40
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

39275..41161
DNA (1887bp) protein (629aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034712C0 rbh
dipeptidyl aminopeptidase/acylaminoacyl-peptidase rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_68_41
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(41165..41641)
DNA (477bp) protein (159aa)
single-stranded DNA-binding protein n=1 Tax=Microbacterium barkeri RepID=UPI00031A5B72
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
smpB; tmRNA-binding protein; K03664 SsrA-binding protein
scnpilot_solids1_trim150_scaffold_68_42
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(41695..42609)
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003119B4C rbh
cell division protein; K09811 cell division transport system permease protein rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_68_43
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(42606..43586)
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034C3D79 rbh
Contig_1, whole genome shotgun sequence {ECO:0000313|EMBL:KIP95855.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
ftsE; ATPase; K09812 cell division transport system ATP-binding protein rbh
scnpilot_solids1_trim150_scaffold_68_44
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

43663..44646
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000346FF3B
hypothetical protein
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_68_45
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(44653..45762)
DNA (1110bp) protein (370aa)
peptide chain release factor 2 n=1 Tax=Microbacterium barkeri RepID=UPI00031B32E3 rbh
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
prfB; protein chain release factor B; K02836 peptide chain release factor 2 rbh
scnpilot_solids1_trim150_scaffold_68_46
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

45865..47100
DNA (1236bp) protein (412aa)
major facilitator transporter n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034B6C9D rbh
Major facilitator transporter {ECO:0000313|EMBL:EYT58517.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
permease of the major facilitator superfamily rbh
scnpilot_solids1_trim150_scaffold_68_47
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(47102..47536)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KMY9_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL23761.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
putative secreted protein
scnpilot_solids1_trim150_scaffold_68_48
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(47536..48060)
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034A8F26
TadE family protein {ECO:0000313|EMBL:KDA06076.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_68_49
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(48029..48430)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KIT4_9MICO
TadE-like protein {ECO:0000313|EMBL:KJQ54594.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_68_50
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(48438..48629)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2XIY1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KDA06074.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_68_51
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(48671..49609)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KIT5_9MICO rbh
Bacterial type II secretion system protein F domain protein {ECO:0000313|EMBL:KJQ54592.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
conserved membrane protein, putative pilus assembly protein
scnpilot_solids1_trim150_scaffold_68_52
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(49606..50463)
DNA (858bp) protein (286aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00030D20FC rbh
Type II secretion protein F {ECO:0000313|EMBL:KDA06072.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
conserved membrane protein, putative pilus assembly protein
scnpilot_solids1_trim150_scaffold_68_53
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(50460..51602)
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KLU3_9MICO rbh
Pilus assembly protein CpaF {ECO:0000313|EMBL:KDA06071.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
putative ATPase, type II/type IV pathway secretion protein; K02283 pilus assembly protein CpaF rbh
scnpilot_solids1_trim150_scaffold_68_trna_1
unknown

Not on your lists

51711..51792
DNA (82bp)
transferRNA Leu
scnpilot_solids1_trim150_scaffold_68_54
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

51839..52549
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000309F0B0 rbh
Inner membrane protein YghB {ECO:0000313|EMBL:KJL28983.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein; K03975 membrane-associated protein rbh
scnpilot_solids1_trim150_scaffold_68_55
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(52546..53355)
DNA (810bp) protein (270aa)
DNA repair protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E28642 rbh
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
hypothetical protein; K10979 DNA end-binding protein Ku rbh
scnpilot_solids1_trim150_scaffold_68_56
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

53423..55432
DNA (2010bp) protein (670aa)
ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1] rbh
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002DB9A8D rbh
Putative DNA ligase-like protein {ECO:0000313|EMBL:KJL28981.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
scnpilot_solids1_trim150_scaffold_68_57
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(55439..56359)
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000348DBF7 rbh
Cation transporter {ECO:0000313|EMBL:EYT58490.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
Co/Zn/Cd efflux system component; K03295 cation efflux system protein, CDF family rbh
scnpilot_solids1_trim150_scaffold_68_58
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(56438..57031)
DNA (594bp) protein (198aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; Nucleoside-triphosphate pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" sour
xanthosine triphosphate pyrophosphatase; K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19] rbh
Non-canonical purine NTP pyrophosphatase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KLV4_9MICO rbh
scnpilot_solids1_trim150_scaffold_68_59
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(57028..57762)
DNA (735bp) protein (245aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104188};; tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_00564}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
rph; RNase PH; K00989 ribonuclease PH [EC:2.7.7.56]
Ribonuclease PH n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KJP3_9MICO rbh
Displaying items 31-60 of 119 in total

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