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scnpilot_solids1_trim150_scaffold_68

Search features with annotation key words

Displaying items 91-119 of 119 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_68_90
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

88237..90006
DNA (1770bp) protein (590aa)
Biotin carboxylase {ECO:0000313|EMBL:KJL20750.1}; EC=6.3.4.14 {ECO:0000313|EMBL:KJL20750.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
accC; acetyl/propionyl-CoA carboxylase, alpha subunit; K11263 acetyl-/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.3.4.14] rbh
Acetyl-CoA carboxylase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KIX3_9MICO rbh
scnpilot_solids1_trim150_scaffold_68_91
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(90108..91586)
DNA (1479bp) protein (493aa)
lpdA; pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] rbh
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KNW2_9MICO rbh
Flavoprotein disulfide reductase {ECO:0000313|EMBL:KDA06056.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
scnpilot_solids1_trim150_scaffold_68_92
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

91602..92435
DNA (834bp) protein (278aa)
deoD; purine nucleoside phosphorylase; K03783 purine-nucleoside phosphorylase [EC:2.4.2.1] rbh
purine nucleoside phosphorylase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034B9E79 rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_68_93
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

92432..94117
DNA (1686bp) protein (562aa)
cpsG; phosphomannomutase; K01840 phosphomannomutase [EC:5.4.2.8] rbh
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KJR1_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EQM78245.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
scnpilot_solids1_trim150_scaffold_68_94
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

94120..94377
DNA (258bp) protein (86aa)
Phosphocarrier protein HPr {ECO:0000313|EMBL:KJL28957.1}; EC=2.7.11.- {ECO:0000313|EMBL:KJL28957.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K930_9MICO
scnpilot_solids1_trim150_scaffold_68_95
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(94384..96300)
DNA (1917bp) protein (639aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KIX9_9MICO rbh
Putative licABCH operon regulator {ECO:0000313|EMBL:KJL23834.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
transcriptional antiterminator; K03491 lichenan operon transcriptional antiterminator rbh
scnpilot_solids1_trim150_scaffold_68_96
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

96453..96770
DNA (318bp) protein (106aa)
phosphotransferase system cellobiose-specific component IIB; K02760 PTS system, cellobiose-specific IIB component [EC:2.7.1.69]
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000377CDE5
PTS system, Lactose/Cellobiose specific IIB subunit {ECO:0000313|EMBL:KJL23835.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
scnpilot_solids1_trim150_scaffold_68_97
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

96767..97045
DNA (279bp) protein (93aa)
Phosphocarrier protein HPr {ECO:0000313|EMBL:KJL20743.1}; EC=2.7.11.- {ECO:0000313|EMBL:KJL20743.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
phosphotransferase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034DA6F8
phosphotransferase system, HPr-related protein; K11189 phosphocarrier protein
scnpilot_solids1_trim150_scaffold_68_98
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

97042..98697
DNA (1656bp) protein (552aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
ptsI; phosphoenolpyruvate-protein kinase; K08483 phosphotransferase system, enzyme I, PtsI [EC:2.7.3.9] rbh
phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000347D6D2 rbh
scnpilot_solids1_trim150_scaffold_68_99
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

98737..100815
DNA (2079bp) protein (693aa)
phosphotransferase system, mannitol-specific IIBC component; K02798 PTS system, mannitol-specific IIA component [EC:2.7.1.69]; K02799 PTS system, mannitol-specific IIB component [EC:2.7.1.69]; K02800 PTS system, mannitol-specific IIC component rbh
PTS mannitol transporter subunit IIB n=1 Tax=Microbacterium barkeri RepID=UPI0002D38332 rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_68_100
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

100812..101972
DNA (1161bp) protein (387aa)
Mannitol-1-phosphate 5-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00196, ECO:0000256|SAAS:SAAS00015323}; EC=1.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00196, ECO:0000256|SAAS:SAAS00015317};; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
mtlD; mannitol-1-phosphate/altronate dehydrogenase; K00009 mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17] rbh
mannitol-1-phosphate 5-dehydrogenase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000367E7E3 rbh
scnpilot_solids1_trim150_scaffold_68_101
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

102034..102753
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00035FE8E5
Uncharacterized protein {ECO:0000313|EMBL:EKM98374.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
hypothetical protein; K07090
scnpilot_solids1_trim150_scaffold_68_102
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(102762..103625)
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034DBE76 rbh
Contig_1, whole genome shotgun sequence {ECO:0000313|EMBL:KIP95802.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
PfkB domain-containing protein
scnpilot_solids1_trim150_scaffold_68_103
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(103633..104748)
DNA (1116bp) protein (372aa)
Aminodeoxyfutalosine deaminase {ECO:0000313|EMBL:KJL28946.1}; EC=3.5.4.- {ECO:0000313|EMBL:KJL28946.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
add; adenosine deaminase; K01488 adenosine deaminase [EC:3.5.4.4] rbh
adenosine deaminase n=1 Tax=Microbacterium barkeri RepID=UPI0002E1C748 rbh
scnpilot_solids1_trim150_scaffold_68_104
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(104778..106070)
DNA (1293bp) protein (431aa)
deoA; thymidine phosphorylase; K00758 thymidine phosphorylase [EC:2.4.2.4] rbh
Pyrimidine-nucleoside phosphorylase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KLY8_9MICO rbh
Pyrimidine-nucleoside phosphorylase {ECO:0000313|EMBL:EQM78259.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
scnpilot_solids1_trim150_scaffold_68_105
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(106067..106465)
DNA (399bp) protein (133aa)
Cytidine deaminase {ECO:0000313|EMBL:KJL23847.1}; EC=3.5.4.5 {ECO:0000313|EMBL:KJL23847.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
cytidine deaminase; K01489 cytidine deaminase [EC:3.5.4.5]
Cytidine deaminase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KJS2_9MICO
scnpilot_solids1_trim150_scaffold_68_106
Isoptericola variabilis, Isoptericola, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(106508..107782)
DNA (1275bp) protein (425aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Isoptericola variabilis (strain 225) RepID=F6FPW2_ISOV2 rbh
ABC transporter; K02057 simple sugar transport system permease protein rbh
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEG43751.1}; TaxID=743718 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Isoptericola.;" source="Isoptericola variabilis (strain 225).;"
scnpilot_solids1_trim150_scaffold_68_107
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(107779..109041)
DNA (1263bp) protein (421aa)
ABC transporter permease n=1 Tax=Microbacterium sp. B19 RepID=UPI0003486CEE rbh
ABC transporter permease {ECO:0000313|EMBL:KDA06043.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
ABC transporter permease; K02057 simple sugar transport system permease protein rbh
scnpilot_solids1_trim150_scaffold_68_108
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(109038..110552)
DNA (1515bp) protein (505aa)
ABC transporter ATPase; K02056 simple sugar transport system ATP-binding protein [EC:3.6.3.17] rbh
ABC-type uncharacterized transport systems, ATPase components n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NCD7_MICTS rbh
Heme ABC transporter ATP-binding protein {ECO:0000313|EMBL:KEP76115.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
scnpilot_solids1_trim150_scaffold_68_109
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(110652..111749)
DNA (1098bp) protein (366aa)
Basic membrane lipoprotein n=1 Tax=Isoptericola variabilis (strain 225) RepID=F6FPV9_ISOV2 rbh
Membrane protein {ECO:0000313|EMBL:KDA06042.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
basic membrane lipoprotein; K07335 basic membrane protein A and related proteins rbh
scnpilot_solids1_trim150_scaffold_68_110
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(111855..112967)
DNA (1113bp) protein (371aa)
Mannose-1-phosphate guanylyltransferase RfbM {ECO:0000313|EMBL:KJL28939.1}; EC=2.7.7.13 {ECO:0000313|EMBL:KJL28939.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
manC; mannose-1-phosphate guanylyltransferase; K00971 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] rbh
mannose-1-phosphate guanylyltransferase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034CAF86 rbh
scnpilot_solids1_trim150_scaffold_68_111
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

113124..113549
DNA (426bp) protein (142aa)
Succinate dehydrogenase/fumarate reductase, cytochrome b subunit n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NCE0_MICTS
Succinate dehydrogenase/Fumarate reductase transmembrane subunit {ECO:0000313|EMBL:KJQ54539.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
succinate dehydrogenase/fumarate reductase, cytochrome b subunit; K00241 succinate dehydrogenase cytochrome b556 subunit
scnpilot_solids1_trim150_scaffold_68_112
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

113549..114001
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003161C07
Contig_17, whole genome shotgun sequence {ECO:0000313|EMBL:KIP91493.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
sdhD; succinate dehydrogenase, hydrophobic anchor subunit; K00242 succinate dehydrogenase membrane anchor subunit
scnpilot_solids1_trim150_scaffold_68_113
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

114027..115853
DNA (1827bp) protein (609aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000256|RuleBase:RU362051}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU362051};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
sdhA; succinate dehydrogenase/fumarate reductase, flavoprotein subunit; K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] rbh
succinate dehydrogenase n=1 Tax=Microbacterium barkeri RepID=UPI00031CD178 rbh
scnpilot_solids1_trim150_scaffold_68_114
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

115856..116617
DNA (762bp) protein (254aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
sdhB; succinate dehydrogenase/fumarate reductase, Fe-S protein subunit; K00240 succinate dehydrogenase iron-sulfur subunit [EC:1.3.99.1] rbh
succinate dehydrogenase n=1 Tax=Microbacterium barkeri RepID=UPI0002D3727C rbh
scnpilot_solids1_trim150_scaffold_68_115
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

116638..117756
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2XS45_9MICO rbh
Inner membrane protein YhjD {ECO:0000313|EMBL:KJL20720.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein; K07058 membrane protein rbh
scnpilot_solids1_trim150_scaffold_68_116
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

117766..118659
DNA (894bp) protein (298aa)
Exodeoxyribonuclease {ECO:0000313|EMBL:KJL34673.1}; EC=3.1.11.2 {ECO:0000313|EMBL:KJL34673.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
exonuclease III; K01142 exodeoxyribonuclease III [EC:3.1.11.2] rbh
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K952_9MICO rbh
scnpilot_solids1_trim150_scaffold_68_117
unknown

Not on your lists

118799..118960
DNA (162bp) protein (54aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_68_118
unknown

Not on your lists

comp(118942..119022)
DNA (81bp) protein (27aa)

This feature has no annotations

Displaying items 91-119 of 119 in total

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