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scnpilot_solids1_trim150_scaffold_100

Search features with annotation key words

Displaying items 91-120 of 239 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_100_88
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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comp(83909..86455)
DNA (2547bp) protein (849aa)
gyrA; type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit; K02469 DNA gyrase subunit A [EC:5.99.1.3] rbh
DNA gyrase subunit A n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KB45_9MICO rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_100_89
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(86653..88746)
DNA (2094bp) protein (698aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
gyrB; type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit; K02470 DNA gyrase subunit B [EC:5.99.1.3] rbh
DNA gyrase subunit B n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034698E0 rbh
scnpilot_solids1_trim150_scaffold_100_90
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(88859..89347)
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003071B5A
Uncharacterized protein {ECO:0000313|EMBL:KJL21739.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives
scnpilot_solids1_trim150_scaffold_100_91
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(89337..90539)
DNA (1203bp) protein (401aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002DF205F rbh
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
recF; recombinational DNA repair ATPase; K03629 DNA replication and repair protein RecF rbh
scnpilot_solids1_trim150_scaffold_100_92
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(90737..91936)
DNA (1200bp) protein (400aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
dnaN; DNA polymerase sliding clamp subunit; K02338 DNA polymerase III subunit beta [EC:2.7.7.7] rbh
DNA polymerase III subunit beta n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K1H9_9MICO rbh
scnpilot_solids1_trim150_scaffold_100_93
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(92313..93704)
DNA (1392bp) protein (464aa)
Chromosomal replication initiator protein DnaA n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KB48_9MICO rbh
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
dnaA; ATPase; K02313 chromosomal replication initiator protein rbh
scnpilot_solids1_trim150_scaffold_100_94
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


94024..94161
DNA (138bp) protein (46aa)
50S ribosomal protein L34 n=2 Tax=Microbacterium RepID=H8E9B4_9MICO
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
rpmH; ribosomal protein L34; K02914 large subunit ribosomal protein L34
scnpilot_solids1_trim150_scaffold_100_95
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

94345..94530
DNA (186bp) protein (62aa)
RNase P protein component; K03536 ribonuclease P protein component [EC:3.1.26.5]
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00037F1268
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_100_96
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

94527..94892
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00031B434E
Putative membrane protein insertion efficiency factor {ECO:0000256|HAMAP-Rule:MF_00386, ECO:0000256|SAAS:SAAS00100919}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
hypothetical protein; K08998 hypothetical protein
scnpilot_solids1_trim150_scaffold_100_97
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

94882..95955
DNA (1074bp) protein (358aa)
Preprotein translocase subunit YidC n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K1I4_9MICO rbh
Membrane protein insertase MisCA {ECO:0000313|EMBL:KJL25132.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
preprotein translocase subunit YidC; K03217 preprotein translocase subunit YidC rbh
scnpilot_solids1_trim150_scaffold_100_98
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

95955..96443
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000349E185
Contig_32, whole genome shotgun sequence {ECO:0000313|EMBL:KIP89019.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
RNA-binding protein; K06346 spoIIIJ-associated protein
scnpilot_solids1_trim150_scaffold_100_99
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

96606..97232
DNA (627bp) protein (209aa)
gidB; S-adenosylmethionine-dependent methyltransferase; K03501 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034DEDA2
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_100_100
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

97711..98013
DNA (303bp) protein (101aa)
Excinuclease ABC C subunit domain protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E1C2_9MICO
GIY-YIG nuclease superfamily protein {ECO:0000313|EMBL:KJQ53732.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
excinuclease ABC subunit C domain-containing protein; K07461 putative endonuclease
scnpilot_solids1_trim150_scaffold_100_101
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

98379..99311
DNA (933bp) protein (311aa)
Sporulation initiation inhibitor protein Soj {ECO:0000313|EMBL:KJL22865.1}; EC=3.6.-.- {ECO:0000313|EMBL:KJL22865.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
Chromosome partitioning protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KDX8_9MICO rbh
parA; ATPase; K03496 chromosome partitioning protein rbh
scnpilot_solids1_trim150_scaffold_100_102
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

99311..100279
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002FB9CBD rbh
Contig_32, whole genome shotgun sequence {ECO:0000313|EMBL:KIP89016.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
parB; transcriptional regulator; K03497 chromosome partitioning protein, ParB family rbh
scnpilot_solids1_trim150_scaffold_100_103
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

100923..101219
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E661E3
Uncharacterized protein {ECO:0000313|EMBL:KJL22862.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
tryptophan synthase alpha chain
scnpilot_solids1_trim150_scaffold_100_104
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(101310..101633)
DNA (324bp) protein (108aa)
thioredoxin n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037AE5E0
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
trxA; thiol-disulfide isomerase and thioredoxins; K03671 thioredoxin 1
scnpilot_solids1_trim150_scaffold_100_105
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(101696..102649)
DNA (954bp) protein (318aa)
trxB; thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] rbh
thioredoxin reductase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003465085 rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_100_106
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(102803..104833)
DNA (2031bp) protein (677aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002FC8B34 rbh
Uncharacterized protein {ECO:0000313|EMBL:KDA05125.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component rbh
scnpilot_solids1_trim150_scaffold_100_107
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

104837..106447
DNA (1611bp) protein (537aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002D6F410 rbh
Contig_32, whole genome shotgun sequence {ECO:0000313|EMBL:KIP89035.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
methylase of polypeptide chain release factors rbh
scnpilot_solids1_trim150_scaffold_100_108
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

106476..107534
DNA (1059bp) protein (353aa)
Limonene 1,2-monooxygenase {ECO:0000313|EMBL:KJL25120.1}; EC=1.14.13.107 {ECO:0000313|EMBL:KJL25120.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
limonene 1,2-monooxygenase (EC:1.14.13.107) rbh
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002D4EE86 rbh
scnpilot_solids1_trim150_scaffold_100_109
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

107582..108115
DNA (534bp) protein (178aa)
Uncharacterized protein {ECO:0000313|EMBL:CDK01582.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
Uncharacterized protein id=7722088 bin=CNBR_ACT species=Microbacterium laevaniformans genus=Microbacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=CNBR_ACT organism_group=Actinobacteria
scnpilot_solids1_trim150_scaffold_100_110
Brachybacterium phenoliresistens, Brachybacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(108123..109367)
DNA (1245bp) protein (415aa)
FAD-binding monooxygenase n=1 Tax=Glaciibacter superstes RepID=UPI0003B4C113 rbh
FAD-binding monooxygenase {ECO:0000313|EMBL:EWS80979.1}; TaxID=396014 species="Bacteria; Actinobacteria; Micrococcales; Dermabacteraceae; Brachybacterium.;" source="Brachybacterium phenoliresistens.;"
FAD-binding monooxygenase rbh
scnpilot_solids1_trim150_scaffold_100_111
Brachybacterium phenoliresistens, Brachybacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

109443..110033
DNA (591bp) protein (197aa)
transcriptional regulator n=1 Tax=Ruania albidiflava RepID=UPI0003B4CED1
Transcriptional regulator {ECO:0000313|EMBL:EWS80980.1}; TaxID=396014 species="Bacteria; Actinobacteria; Micrococcales; Dermabacteraceae; Brachybacterium.;" source="Brachybacterium phenoliresistens.;"
TetR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_100_112
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

110053..111489
DNA (1437bp) protein (479aa)
pcnB; tRNA nucleotidyltransferase/poly(A) polymerase; K00970 poly(A) polymerase [EC:2.7.7.19] rbh
RNA nucleotidyltransferase n=1 Tax=Microbacterium barkeri RepID=UPI0002E564FC rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_100_113
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

111654..113285
DNA (1632bp) protein (544aa)
peptide ABC transporter substrate-binding protein n=1 Tax=Microbacterium sp. B19 RepID=UPI00034A07EE rbh
Putative D,D-dipeptide-binding periplasmic protein DdpA {ECO:0000313|EMBL:KJL24659.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
ABC transporter solute-binding protein rbh
scnpilot_solids1_trim150_scaffold_100_114
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

113366..114448
DNA (1083bp) protein (361aa)
peptide ABC transporter permease n=1 Tax=Leucobacter salsicius RepID=UPI000347806E rbh
Dipeptide transport system permease protein DppB {ECO:0000313|EMBL:KJL34170.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
ABC-type dipeptide/oligopeptide transport systems, permease components; K02033 peptide/nickel transport system permease protein rbh
scnpilot_solids1_trim150_scaffold_100_115
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

114450..115505
DNA (1056bp) protein (352aa)
peptide ABC transporter permease n=1 Tax=Leucobacter salsicius RepID=UPI0003480C01 rbh
Glutathione transport system permease protein GsiD {ECO:0000313|EMBL:KJL24657.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
ABC transporter permease rbh
scnpilot_solids1_trim150_scaffold_100_116
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

115502..117223
DNA (1722bp) protein (574aa)
Glutathione import ATP-binding protein GsiA {ECO:0000313|EMBL:KJL34172.1}; EC=3.6.3.- {ECO:0000313|EMBL:KJL34172.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
monosaccharide-transporting ATPase (EC:3.6.3.17); K02031 peptide/nickel transport system ATP-binding protein; K02032 peptide/nickel transport system ATP-binding protein rbh
hypothetical protein n=1 Tax=Leucobacter salsicius RepID=UPI00034CFBFE rbh
scnpilot_solids1_trim150_scaffold_100_117
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

117372..118685
DNA (1314bp) protein (438aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00035ED651 rbh
Acetoin dehydrogenase operon transcriptional activator AcoR {ECO:0000313|EMBL:KJL24663.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
transcriptional activator of acetoin/glycerol metabolism rbh
Displaying items 91-120 of 239 in total

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