ggKbase home page

scnpilot_solids1_trim150_scaffold_100

Search features with annotation key words

Displaying items 31-60 of 239 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_100_31
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31620..32012)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034DB32D
Na(+)/H(+) antiporter subunit G {ECO:0000313|EMBL:KJL25261.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
multisubunit Na+/H+ antiporter, MnhG subunit; K05571 multicomponent Na+:H+ antiporter subunit G
scnpilot_solids1_trim150_scaffold_100_32
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32009..32281)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KI47_9MICO
Putative monovalent cation/H+ antiporter subunit F {ECO:0000313|EMBL:KJL26970.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
multisubunit Na+/H+ antiporter, MnhF subunit; K05570 multicomponent Na+:H+ antiporter subunit F
scnpilot_solids1_trim150_scaffold_100_33
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32278..32865)
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002EFB649
Sodium:proton antiporter {ECO:0000313|EMBL:KDA05167.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
multisubunit Na+/H+ antiporter, MnhE subunit; K05569 multicomponent Na+:H+ antiporter subunit E
scnpilot_solids1_trim150_scaffold_100_34
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(32862..34415)
DNA (1554bp) protein (518aa)
cation:proton antiporter n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034902AD rbh
formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit; K05568 multicomponent Na+:H+ antiporter subunit D rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_100_35
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(34412..34975)
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000344C70B
multisubunit Na+/H+ antiporter, MnhC subunit; K05567 multicomponent Na+:H+ antiporter subunit C
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_100_36
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34975..37929)
DNA (2955bp) protein (985aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KFY8_9MICO rbh
Na(+)/H(+) antiporter subunit A {ECO:0000313|EMBL:KJL26966.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
NADH:ubiquinone oxidoreductase subunit 5 (chain L)/multisubunit Na+/H+ antiporter, MnhA subunit; K05565 multicomponent Na+:H+ antiporter subunit A rbh
scnpilot_solids1_trim150_scaffold_100_37
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38128..39723
DNA (1596bp) protein (532aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000380892D rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL26964.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_100_38
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(39744..40817)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KK54_9MICO rbh
HTH-type transcriptional repressor CytR {ECO:0000313|EMBL:KJL26963.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
transcriptional regulator
scnpilot_solids1_trim150_scaffold_100_39
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

40877..42100
DNA (1224bp) protein (408aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034ADA26 rbh
MFS transporter permease {ECO:0000313|EMBL:EYT60716.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
permease of the major facilitator superfamily
scnpilot_solids1_trim150_scaffold_100_40
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

42110..42805
DNA (696bp) protein (232aa)
Endonuclease NucS {ECO:0000256|HAMAP-Rule:MF_00722}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00722};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
endonuclease n=1 Tax=Microbacterium barkeri RepID=UPI000305F11E rbh
nuclease of the RecB family; K07503 hypothetical protein
scnpilot_solids1_trim150_scaffold_100_41
Leucobacter komagatae, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

42877..43536
DNA (660bp) protein (220aa)
phosphatase; K01091 phosphoglycolate phosphatase [EC:3.1.3.18]
phosphatase n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037FE277
Leucobacter komagatae strain VKM ST2845 L_komagatae_27, whole genome shotgun sequence {ECO:0000313|EMBL:KIP51629.1}; TaxID=55969 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter komagatae.;"
scnpilot_solids1_trim150_scaffold_100_42
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

43608..44027
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Streptomyces turgidiscabies Car8 RepID=L7F4K7_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KHL00054.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
scnpilot_solids1_trim150_scaffold_100_43
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

44074..45396
DNA (1323bp) protein (441aa)
Uncharacterized protein n=1 Tax=Streptomyces turgidiscabies Car8 RepID=L7F4E8_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:KHL00055.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_100_44
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(45465..45671)
DNA (207bp) protein (69aa)
Cold-shock protein n=2 Tax=Microbacteriaceae RepID=T5KDR2_9MICO
Putative cold shock protein A {ECO:0000313|EMBL:KJQ52476.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
csp; cold shock proteins; K03704 cold shock protein (beta-ribbon, CspA family)
scnpilot_solids1_trim150_scaffold_100_45
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(46458..46838)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI0003784A39
Rhodanese {ECO:0000313|EMBL:EYT56230.1}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
rhodanese domain-containing protein
scnpilot_solids1_trim150_scaffold_100_46
Cellulomonas flavigena, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(46853..47473)
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Leucobacter salsicius RepID=UPI000381C9AD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG75752.1}; TaxID=446466 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas flavigena (strain ATCC 482 / DSM 20109 / NCIB 8073 / NRS; 134).;"
scnpilot_solids1_trim150_scaffold_100_47
Gordonia hirsuta, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(47491..48282)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Gordonia hirsuta DSM 44140 = NBRC 16056 RepID=L7LAL9_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:GAC57801.1}; TaxID=1121927 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia hirsuta DSM 44140 = NBRC 16056.;"
hypothetical protein; K07090 rbh
scnpilot_solids1_trim150_scaffold_100_48
Leucobacter sp. UCD-THU, Leucobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(48304..49722)
DNA (1419bp) protein (473aa)
Zn-dependent hydrolase n=1 Tax=Leucobacter salsicius RepID=UPI00034762B7 rbh
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=1292023 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leucobacter.;" source="Leucobacter sp. UCD-THU.;"
thiosulfate sulfurtransferase rbh
scnpilot_solids1_trim150_scaffold_100_49
Agrococcus pavilionensis, Agrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(49930..50304)
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Leucobacter salsicius RepID=UPI000344D895
Uncharacterized protein {ECO:0000313|EMBL:ERG64431.1}; TaxID=1330458 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Agrococcus.;" source="Agrococcus pavilionensis RW1.;"
thioredoxin
scnpilot_solids1_trim150_scaffold_100_50
Corynebacterium terpenotabidum, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(50331..50516)
DNA (186bp) protein (62aa)
hypothetical protein n=1 Tax=Leucobacter salsicius RepID=UPI0003460C16
Uncharacterized protein {ECO:0000313|EMBL:AGP30761.1}; TaxID=1200352 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium terpenotabidum Y-11.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_100_51
Leifsonia xyli, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

50589..50933
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Leifsonia xyli subsp. cynodontis DSM 46306 RepID=U3P5G1_LEIXC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGW41550.1}; TaxID=1389489 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia xyli subsp. cynodontis DSM 46306.;"
scnpilot_solids1_trim150_scaffold_100_52
Micrococcus luteus, Micrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

51269..54721
DNA (3453bp) protein (1151aa)
TrwC relaxase n=1 Tax=Nesterenkonia alba RepID=UPI0003B656A5 rbh
Putative TraA {ECO:0000313|EMBL:EZP32908.1}; TaxID=1270 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Micrococcus.;" source="Micrococcus luteus (Micrococcus lysodeikticus).;"
TrwC relaxase rbh
scnpilot_solids1_trim150_scaffold_100_53
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(54770..55558)
DNA (789bp) protein (263aa)
cell filamentation protein n=1 Tax=Humibacter albus RepID=UPI0003B49E93
Uncharacterized protein {ECO:0000313|EMBL:GAB95155.1}; Flags: Fragment;; TaxID=1184609 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;"
LuxR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_100_54
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(55575..55781)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6X8K6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:GAB95154.1}; TaxID=1184609 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;"
scnpilot_solids1_trim150_scaffold_100_55
Micrococcus luteus, Micrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(55894..56118)
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Nesterenkonia alba RepID=UPI0003B39C8C
DNA binding domain, excisionase family {ECO:0000313|EMBL:EZP32905.1}; TaxID=1270 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Micrococcus.;" source="Micrococcus luteus (Micrococcus lysodeikticus).;"
scnpilot_solids1_trim150_scaffold_100_56
Propionibacterium freudenreichii, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

56217..56810
DNA (594bp) protein (198aa)
DNA-binding protein n=1 Tax=Nesterenkonia alba RepID=UPI0003B6657C
Uncharacterized protein {ECO:0000313|EMBL:CDP48112.1}; TaxID=66712 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium freudenreichii subsp. freudenreichii.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_100_57
Micrococcus luteus, Micrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

56863..58146
DNA (1284bp) protein (428aa)
hypothetical protein n=1 Tax=Nesterenkonia alba RepID=UPI0003B6D4FC rbh
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EZP32903.1}; TaxID=1270 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Micrococcus.;" source="Micrococcus luteus (Micrococcus lysodeikticus).;"
int; site-specific recombinase rbh
scnpilot_solids1_trim150_scaffold_100_trna_3
unknown

Not on your lists

comp(58226..58309)
DNA (84bp)
transferRNA Leu
scnpilot_solids1_trim150_scaffold_100_58
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

58551..59213
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000308051C rbh
FHA domain-containing protein FhaA {ECO:0000313|EMBL:KJL30022.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
FHA domain
scnpilot_solids1_trim150_scaffold_100_59
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

59210..59707
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KB23_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EQM73044.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
FHA domain
Displaying items 31-60 of 239 in total

View Taxonomy