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scnpilot_solids1_trim150_scaffold_100_44

Organism: SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(45465..45671)

Top 3 Functional Annotations

Value Algorithm Source
Cold-shock protein n=2 Tax=Microbacteriaceae RepID=T5KDR2_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 97.1
  • Coverage: 68.0
  • Bit_score: 140
  • Evalue 7.10e-31
Putative cold shock protein A {ECO:0000313|EMBL:KJQ52476.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.5
  • Coverage: 68.0
  • Bit_score: 141
  • Evalue 3.40e-31
csp; cold shock proteins; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 88.2
  • Coverage: 68.0
  • Bit_score: 132
  • Evalue 6.10e-29

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Taxonomy

Microbacterium sp. SA39 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 207
ATGAGCACCCAGGGCACGGTCAAGTGGTTCAACTCGGAGAAGGGCTTCGGCTTCATCTCCCCCGACGACGGAGGCGCCGACGTGTTCGCGCACTACTCCGCAATCCAGTCTTCCGGCTACCGCTCCCTCGACGAGAACCAGCGCGTCGAGTTCGATGTGGCGCAGGGCCCCAAGGGCCTGCAGGCTGAGAACATCCGCCCCCTCTGA
PROTEIN sequence
Length: 69
MSTQGTVKWFNSEKGFGFISPDDGGADVFAHYSAIQSSGYRSLDENQRVEFDVAQGPKGLQAENIRPL*