ggKbase home page

scnpilot_solids1_trim150_scaffold_103

Search features with annotation key words

Displaying items 1-30 of 101 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_103_1
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(96..452)
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Agromyces subbeticus RepID=UPI0003B5E475
hypothetical protein
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_103_2
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

855..1283
DNA (429bp) protein (143aa)
transcriptional regulator n=1 Tax=Microbacterium barkeri RepID=UPI00031CCA50
Transcriptional regulator {ECO:0000313|EMBL:KDA05003.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
transcriptional regulator
scnpilot_solids1_trim150_scaffold_103_3
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1357..2985
DNA (1629bp) protein (543aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KT22_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EQM86823.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
hypothetical protein; K07192 flotillin rbh
scnpilot_solids1_trim150_scaffold_103_4
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3247..5826
DNA (2580bp) protein (860aa)
ATP-dependent RNA helicase HrpB {ECO:0000313|EMBL:KJQ53874.1}; EC=3.6.4.13 {ECO:0000313|EMBL:KJQ53874.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
ATP-dependent helicase HrpB; K03579 ATP-dependent helicase HrpB [EC:3.6.4.13] rbh
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L3E5_9MICO rbh
scnpilot_solids1_trim150_scaffold_103_5
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5827..6555)
DNA (729bp) protein (243aa)
Antibiotic ABC transporter permease n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L8B9_9MICO rbh
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
ABC-2 type transporter family protein rbh
scnpilot_solids1_trim150_scaffold_103_6
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6552..7307)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L6G1_9MICO rbh
Putative ABC transporter ATP-binding protein YbhF {ECO:0000313|EMBL:KJL19840.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
ABC transporter family protein
scnpilot_solids1_trim150_scaffold_103_7
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7589..8176)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L488_9MICO
HTH-type transcriptional regulator BetI {ECO:0000313|EMBL:KJL19839.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
putative TetR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_103_8
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8248..9282)
DNA (1035bp) protein (345aa)
sorbitol dehydrogenase (EC:1.1.1.14); K00008 L-iditol 2-dehydrogenase [EC:1.1.1.14] rbh
Sorbitol dehydrogenase n=1 Tax=Rhodococcus opacus (strain B4) RepID=C1B3Q4_RHOOB rbh
Sorbitol dehydrogenase {ECO:0000313|EMBL:KDA05037.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
scnpilot_solids1_trim150_scaffold_103_9
Sinomonas sp. MUSC 117, Sinomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9452..10483
DNA (1032bp) protein (344aa)
zinc-containing alcohol dehydrogenase (EC:1.1.1.-) rbh
alcohol dehydrogenase n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI00028944D4 rbh
Alcohol dehydrogenase {ECO:0000313|EMBL:KHL04453.1}; TaxID=1338436 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Sinomonas.;" source="Sinomonas sp. MUSC 117.;"
scnpilot_solids1_trim150_scaffold_103_10
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10507..11130
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000288F92D
Uncharacterized protein {ECO:0000313|EMBL:KDA05035.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_103_11
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11127..12650
DNA (1524bp) protein (508aa)
ABC transporter; K10441 ribose transport system ATP-binding protein [EC:3.6.3.17] rbh
sugar ABC transporter ATP-binding protein n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000289DACD rbh
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:KDA05034.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
scnpilot_solids1_trim150_scaffold_103_12
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12674..13771
DNA (1098bp) protein (366aa)
sugar ABC transporter permease n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000289B92A rbh
Sugar ABC transporter permease {ECO:0000313|EMBL:KDA05033.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
inner-membrane translocator; K10440 ribose transport system permease protein
scnpilot_solids1_trim150_scaffold_103_13
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13855..14841
DNA (987bp) protein (329aa)
sugar ABC transporter substrate-binding protein n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI0002885181 rbh
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KDA05032.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
putative erythritol ABC transporter, substrate-binding protein EryG rbh
scnpilot_solids1_trim150_scaffold_103_14
Sinomonas sp. MUSC 117, Sinomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14898..16637
DNA (1740bp) protein (580aa)
SCF55.04c; dihydroxyacetone kinase; K00863 dihydroxyacetone kinase [EC:2.7.1.29] rbh
dihydroxyacetone kinase n=1 Tax=Curtobacterium sp. B18 RepID=UPI00034A6BDC rbh
Dihydroxyacetone kinase {ECO:0000313|EMBL:KHL04401.1}; TaxID=1338436 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Sinomonas.;" source="Sinomonas sp. MUSC 117.;"
scnpilot_solids1_trim150_scaffold_103_15
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16645..17121
DNA (477bp) protein (159aa)
ribose 5-phosphate isomerase; K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6]
ribose 5-phosphate isomerase n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000288C467
Ribose 5-phosphate isomerase {ECO:0000313|EMBL:KDA05030.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
scnpilot_solids1_trim150_scaffold_103_16
Pantoea sp. PSNIH1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17150..17914
DNA (765bp) protein (255aa)
triosephosphate isomerase; K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1]
Triosephosphate isomerase n=1 Tax=Pantoea dispersa EGD-AAK13 RepID=U1U7T7_9ENTR
Triosephosphate isomerase {ECO:0000313|EMBL:AIX51140.1}; TaxID=1484158 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. PSNIH1.;"
scnpilot_solids1_trim150_scaffold_103_17
Sinomonas sp. MUSC 117, Sinomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17911..18729
DNA (819bp) protein (273aa)
cytochrome C n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI000288270E
Uncharacterized protein {ECO:0000313|EMBL:KHL04399.1}; TaxID=1338436 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Sinomonas.;" source="Sinomonas sp. MUSC 117.;"
transcriptional regulator protein
scnpilot_solids1_trim150_scaffold_103_18
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18854..20350)
DNA (1497bp) protein (499aa)
L-serine dehydratase 2 {ECO:0000313|EMBL:KJL32239.1}; EC=4.3.1.17 {ECO:0000313|EMBL:KJL32239.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
sdaA; L-serine deaminase; K01752 L-serine dehydratase [EC:4.3.1.17] rbh
serine dehydratase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003748DD6 rbh
scnpilot_solids1_trim150_scaffold_103_19
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

20403..21332
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00036B5E4F rbh
yybE; HTH-type transcriptional regulator YybE rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_103_trna_6
unknown

Not on your lists

comp(21428..21500)
DNA (73bp)
transferRNA Arg
scnpilot_solids1_trim150_scaffold_103_20
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(21571..22206)
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002FE565A
asparagine synthase
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_103_21
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(22259..22918)
DNA (660bp) protein (220aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003497B19
transcriptional regulator
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_103_22
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22987..23787
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000361F2B3
Putative esterase/lipase {ECO:0000313|EMBL:GAD34020.1}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
alpha/beta hydrolase domain-containing protein
scnpilot_solids1_trim150_scaffold_103_23
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23809..24450)
DNA (642bp) protein (214aa)
NADP oxidoreductase n=1 Tax=Microbacterium barkeri RepID=UPI0003104088 rbh
NADP oxidoreductase coenzyme F420-dependent {ECO:0000313|EMBL:KJL29668.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein; K06988 rbh
scnpilot_solids1_trim150_scaffold_103_24
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24511..24645)
DNA (135bp) protein (45aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5L6I9_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL21355.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
scnpilot_solids1_trim150_scaffold_103_25
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24642..26279)
DNA (1638bp) protein (546aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034A8E1A rbh
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
SNF family Na+-dependent transporter; K03308 neurotransmitter:Na+ symporter, NSS family rbh
scnpilot_solids1_trim150_scaffold_103_26
Sanguibacter keddieii, Sanguibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26356..27072)
DNA (717bp) protein (239aa)
Transcriptional regulator, GntR family n=1 Tax=Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 / ST-74) RepID=D1BJF6_SANKS
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ACZ20212.1}; TaxID=446469 species="Bacteria; Actinobacteria; Micrococcales; Sanguibacteraceae; Sanguibacter.;" source="Sanguibacter keddieii (strain ATCC 51767 / DSM 10542 / NCFB 3025 /; ST-74).;"
scnpilot_solids1_trim150_scaffold_103_27
Knoellia sinensis, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27212..28609
DNA (1398bp) protein (466aa)
manganese transporter NRAMP n=1 Tax=Brachybacterium paraconglomeratum RepID=UPI00026C7455 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGN31461.1}; TaxID=1385520 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia sinensis KCTC 19936.;"
manganese transporter NRAMP rbh
scnpilot_solids1_trim150_scaffold_103_28
Brachybacterium muris, Brachybacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28653..29693
DNA (1041bp) protein (347aa)
alcohol dehydrogenase GroES domain-containing protein; K00098 L-idonate 5-dehydrogenase [EC:1.1.1.264] rbh
hypothetical protein n=1 Tax=Brachybacterium muris RepID=UPI000348F716 rbh
Theronine dehydrogenase {ECO:0000313|EMBL:EYT50425.1}; TaxID=1249481 species="Bacteria; Actinobacteria; Micrococcales; Dermabacteraceae; Brachybacterium.;" source="Brachybacterium muris UCD-AY4.;"
scnpilot_solids1_trim150_scaffold_103_29
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29734..30858)
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A862_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD84731.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
dehydrogenase
Displaying items 1-30 of 101 in total

View Taxonomy