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scnpilot_solids1_trim150_scaffold_35_170

Organism: SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 160699..163173

Top 3 Functional Annotations

Value Algorithm Source
superfamily II RNA helicase; K03727 ATP-dependent RNA helicase HelY [EC:3.6.4.-] similarity KEGG
DB: KEGG
  • Identity: 77.3
  • Coverage: 825.0
  • Bit_score: 1243
  • Evalue 0.0
  • rbh
RNA helicase n=1 Tax=Microbacterium barkeri RepID=UPI0002D2C9C5 similarity UNIREF
DB: UNIREF100
  • Identity: 83.6
  • Coverage: 824.0
  • Bit_score: 1386
  • Evalue 0.0
  • rbh
Ski2-like helicase {ECO:0000313|EMBL:KJL18691.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.2
  • Coverage: 824.0
  • Bit_score: 1384
  • Evalue 0.0

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Taxonomy

Microbacterium oxydans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2475
ATGAGCTCGCCGTCCGACCGCTACGCGGCCGCGCAACTGGCATCGCAGCATCCGCAGACCACAGCCTTCGCCGCGGCCCAGCGCTTCGAACTGGATCCGTTCCAGGTGGAGGCGTGCCAGGCTCTGGAACGCGGTCGAAGCGTGCTGGTGGCCGCTCCCACCGGCGCGGGCAAGACCATCGTGGGCGAGTTCGCCATCCACCTCGCCATGCAGACGGCGAACGACAAGGCGTTCTACACGACGCCCATGAAGGCGCTGTCGAACCAGAAGTTCCGCGAGCTGGTCGACGTCTACGGCGCGGACGAGGTCGGCCTGCTCACCGGTGACACCAACATCAACGGCAATGCCCGCATCGTGGTGATGACCACCGAGGTGCTGCGCAACATGCTGTACGCCGGGTCGGACGCGCTCCGCGGCCTGCGCTACGTCGTCATGGACGAGGTCCACTATCTGGCCGACCGCTTCCGCGGTGCGGTGTGGGAGGAGGTCATCCTGCATCTCGCGCAGGATGTGCGCCTCATCTCGCTGAGCGCCACGGTCTCCAACGCCGAGGAGTTCGGCGACTGGCTGGACACCGTGCGCGGGGACACCGACGTGATCGTGTCGGAGATCCGCCCGGTGCCGCTGGAGCAGCACGTGCTCGTGCGCGACGACCTGCTGCCGCTGTTCGACGACCGTGCCGGCTTCGCCACCGCGCAGGTCAACCAGGAGCTGTTCCGCATCCGCTCGGCCGGCGGGCCTCGCTATGAGAGCAACCGCCGTGCGCAGGAGTACCGCGGCAGCCGGCATGCCGGCAGGGAGGCCAAGCGGCCGCCGCGCGGTGGGAGGCGCCCGGTGCGCAACGGCAACATGCACCGCATCGAGCGGATGGACCGCGCCGAGGTCGTGCGACTGCTGGAGCGCTCCAGCCTGCTCCCGGCCATCTTCTTCATCTTCAGCCGTGTGGGCTGCGACGCCGCGGTGCAGCAGATCCGGCGCGCCGGCATCCGACTCACCACGCACGAGGAGCGGACCGAGATCCGCGAGATCGTGAACGACCGCACCCGCTCGCTGCAGGACGAGGATCTCGATGTCCTGGGCTTCTGGGAGTGGCGCGACAACCTCGAACGCGGTGTCGCCGCGCACCATGCGGGTCTTCTGCCGGCGTTCAAGGAGGTGGTCGAGGAGCTCTTCCAGCGCAAGCTGGTGAAGGCGGTCTTCGCCACCGAGACGCTGGCGCTGGGCATCAACATGCCCGCCCGCACCGTGGTGCTGGAGAAGATGGAGAAGTTCAACGGCGAAGCGCGCGTGGCCATCACCTCCGGCGAGTACACGCAGCTCACCGGGCGTGCCGGCCGCCGCGGCATCGACGTCGAGGGGCACGCCGTCGTGCAGTGGACCCAGGGCATGGACCCGCAGGCCGTCGCAGCCCTGGCATCCCGCCGCACCTACCCGCTGAACTCCAGCTTCCGCCCCACGTACAACATGGCGGTCAACCTCATCGACCGCTTCGGGCGCGCGCGTGCGCGCGAGATCCTGGAATCGTCCTTCGCGCAGTTCCAGGCCGACCGGGCCGTCGTGGGGCTCGCCCGCAAGGTCAAGGATGCCGAGGGGTCGCTGGCGGGCTATGAGAAGGCCATGACCTGCGAGCACGGCGACTTCATGGAGTACGCCGCCATCCGGCGAGAGCTCAGCGACCTCGAGAAGAAGAACCGGCGGGATGCCGCGGGCCCGCGCGCGGCGCGCGACAAGCGGATGAAGAAGATCCAGTCGCTGCGCACGCGCATGCAACGGCATCCCTGCCACGGATGCCCGGATCGCGAAGCGCACGCTCGCTGGGCGGAGCGCTATTTCAGCCTGAAGCGCGACACCGACCGCATCCGCCGTCAGATCGAGAACCGCACCGGTTCGGTCGCGCGGACCTTCGACCGTGTGATCGACGTGCTGCGCACGGTCGAGTACCTCGAGGGCGACGGTGACCGGGTCGTGCTGACCGAGGCGGGCAGCACCATGAAGCGCATCTACGGCGAGCGGGACCTGCTGGTGGCCGAGTCCCTGCGACTCGGACTGTGGCGCAATCTGGATGCTCCCTCGCTGGCGGCCATGGCGTGCTGCCTGGTCTACGAGCCGCGGCGCGACGAGCAGAACGCGGGGGAGCGGGGGCTGCCCCGCGGCGCGTTCCGGATCGCCTACGACGCCACGACGAAACTGTGGGCCGACCTCGACGACCTCGAGCACGACTACTCCCTGCCCCGTACCGAGCCGCTGGCTCCGGGCCTTGCCGCCGCGATGCACGCCTGGGCGAGAGGCGGCTCTCTGGATCGCGTGCTCATCGATGCCGACATGGCCGCAGGCGACTTCGTGCGCTGGGCCAAGCAGACCATCGACCTGCTGGACCAGCTGTCGATCGTCGCCGAGGACGGCGAGCTCGCACGCACCGCGCGACGGGCGCTCGACGGCGTGCGACGCGGCATCGTCGCCTACGCGGGGGTGTGA
PROTEIN sequence
Length: 825
MSSPSDRYAAAQLASQHPQTTAFAAAQRFELDPFQVEACQALERGRSVLVAAPTGAGKTIVGEFAIHLAMQTANDKAFYTTPMKALSNQKFRELVDVYGADEVGLLTGDTNINGNARIVVMTTEVLRNMLYAGSDALRGLRYVVMDEVHYLADRFRGAVWEEVILHLAQDVRLISLSATVSNAEEFGDWLDTVRGDTDVIVSEIRPVPLEQHVLVRDDLLPLFDDRAGFATAQVNQELFRIRSAGGPRYESNRRAQEYRGSRHAGREAKRPPRGGRRPVRNGNMHRIERMDRAEVVRLLERSSLLPAIFFIFSRVGCDAAVQQIRRAGIRLTTHEERTEIREIVNDRTRSLQDEDLDVLGFWEWRDNLERGVAAHHAGLLPAFKEVVEELFQRKLVKAVFATETLALGINMPARTVVLEKMEKFNGEARVAITSGEYTQLTGRAGRRGIDVEGHAVVQWTQGMDPQAVAALASRRTYPLNSSFRPTYNMAVNLIDRFGRARAREILESSFAQFQADRAVVGLARKVKDAEGSLAGYEKAMTCEHGDFMEYAAIRRELSDLEKKNRRDAAGPRAARDKRMKKIQSLRTRMQRHPCHGCPDREAHARWAERYFSLKRDTDRIRRQIENRTGSVARTFDRVIDVLRTVEYLEGDGDRVVLTEAGSTMKRIYGERDLLVAESLRLGLWRNLDAPSLAAMACCLVYEPRRDEQNAGERGLPRGAFRIAYDATTKLWADLDDLEHDYSLPRTEPLAPGLAAAMHAWARGGSLDRVLIDADMAAGDFVRWAKQTIDLLDQLSIVAEDGELARTARRALDGVRRGIVAYAGV*