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scnpilot_solids1_trim150_scaffold_35

Search features with annotation key words

Displaying items 151-180 of 188 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_35_147
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

136788..138158
DNA (1371bp) protein (457aa)
Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex {ECO:0000313|EMBL:KJQ55827.1}; EC=2.3.1.12 {ECO:0000313|EMBL:KJQ55827.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
dehydrogenase catalytic domain-containing protein; K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12] rbh
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000348C7C8 rbh
scnpilot_solids1_trim150_scaffold_35_148
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(138202..138795)
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000380D185
HTH-type transcriptional repressor KstR2 {ECO:0000313|EMBL:KJL27996.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
regulatory protein TetR
scnpilot_solids1_trim150_scaffold_35_149
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

138893..140446
DNA (1554bp) protein (518aa)
Methylmalonyl-CoA carboxyltransferase 12S subunit {ECO:0000313|EMBL:KJL18670.1}; EC=2.1.3.1 {ECO:0000313|EMBL:KJL18670.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
propionyl-CoA carboxylase; K01969 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4] rbh
acetyl-CoA carboxylase subunit beta n=1 Tax=Microbacterium barkeri RepID=UPI000365DEA6 rbh
scnpilot_solids1_trim150_scaffold_35_150
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

140446..142362
DNA (1917bp) protein (639aa)
carbamoyl-phosphate synthase L chain ATP-binding; K11263 acetyl-/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.3.4.14] rbh
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034ADB92 rbh
Acetyl-/propionyl-coenzyme A carboxylase alpha chain {ECO:0000313|EMBL:KJQ55830.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
scnpilot_solids1_trim150_scaffold_35_151
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

142359..143522
DNA (1164bp) protein (388aa)
acyl-CoA dehydrogenase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034A62BD rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:KDA05712.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
fadE19; acyl-CoA dehydrogenase rbh
scnpilot_solids1_trim150_scaffold_35_152
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

143532..144011
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000349DD6C
Dehydratase {ECO:0000313|EMBL:EYT59271.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
MaoC domain-containing protein dehydratase
scnpilot_solids1_trim150_scaffold_35_153
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

144008..144811
DNA (804bp) protein (268aa)
putative citrate lyase beta chain; K01644 citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.6 4.1.3.34] rbh
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003076DB0 rbh
Citrate lyase {ECO:0000313|EMBL:EYT59270.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
scnpilot_solids1_trim150_scaffold_35_154
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(144819..145403)
DNA (585bp) protein (195aa)
fructose-2,6-bisphosphatase; K15634 probable phosphoglycerate mutase [EC:5.4.2.1]
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002F32F51
Contig_2, whole genome shotgun sequence {ECO:0000313|EMBL:KIP95421.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
scnpilot_solids1_trim150_scaffold_35_155
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(145413..146225)
DNA (813bp) protein (271aa)
NAD-dependent protein deacetylase {ECO:0000313|EMBL:KJL18676.1}; EC=3.5.1.- {ECO:0000313|EMBL:KJL18676.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002D479B5 rbh
NAD-dependent protein deacetylase, SIR2 family rbh
scnpilot_solids1_trim150_scaffold_35_156
Brachybacterium phenoliresistens, Brachybacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

146332..147138
DNA (807bp) protein (269aa)
rRNA methylase; K00599 [EC:2.1.1.-] rbh
rRNA methyltransferase n=1 Tax=Ruania albidiflava RepID=UPI0003B3E1B9 rbh
RNA methyltransferase {ECO:0000313|EMBL:EWS82728.1}; TaxID=396014 species="Bacteria; Actinobacteria; Micrococcales; Dermabacteraceae; Brachybacterium.;" source="Brachybacterium phenoliresistens.;"
scnpilot_solids1_trim150_scaffold_35_157
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(147767..148597)
DNA (831bp) protein (277aa)
SGNH hydrolase n=1 Tax=Microbacterium barkeri RepID=UPI0002FE7AB0 rbh
Contig_2, whole genome shotgun sequence {ECO:0000313|EMBL:KIP95418.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
lysophospholipase L1
scnpilot_solids1_trim150_scaffold_35_158
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

148682..150451
DNA (1770bp) protein (590aa)
RNA helicase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KG74_9MICO rbh
Contig_2, whole genome shotgun sequence {ECO:0000313|EMBL:KIP95417.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
DNA or RNA helicase of superfamily II rbh
scnpilot_solids1_trim150_scaffold_35_159
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

150559..151647
DNA (1089bp) protein (363aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002D36A26 rbh
VIT family protein {ECO:0000313|EMBL:KJL18680.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_35_trna_4
unknown

Not on your lists

151746..151830
DNA (85bp)
transferRNA Leu
scnpilot_solids1_trim150_scaffold_35_160
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

151893..153188
DNA (1296bp) protein (432aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000303F64B rbh
acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_35_161
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

153240..154070
DNA (831bp) protein (277aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
uppP; undecaprenyl-diphosphatase UppP (EC:3.6.1.27) rbh
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003467480 rbh
scnpilot_solids1_trim150_scaffold_35_162
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(154072..154914)
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002D26BB8 rbh
Contig_2, whole genome shotgun sequence {ECO:0000313|EMBL:KIP95413.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_35_163
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

155023..155694
DNA (672bp) protein (224aa)
Phosphorylated carbohydrates phosphatase {ECO:0000313|EMBL:KJQ55845.1}; EC=3.1.3.- {ECO:0000313|EMBL:KJQ55845.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KE79_9MICO rbh
phosphatase/phosphohexomutase
scnpilot_solids1_trim150_scaffold_35_164
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

155691..156701
DNA (1011bp) protein (337aa)
gcd14; tRNA(1-methyladenosine) methyltransferase; K07442 tRNA (adenine57-N1/adenine58-N1)-methyltransferase [EC:2.1.1.219 2.1.1.220] rbh
SAM-dependent methyltransferase n=1 Tax=Microbacterium barkeri RepID=UPI0003106F6E rbh
Contig_2, whole genome shotgun sequence {ECO:0000313|EMBL:KIP95411.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
scnpilot_solids1_trim150_scaffold_35_165
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

156712..157617
DNA (906bp) protein (302aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
FKBP-type peptidyl-prolyl cis-trans isomerase 1; K01802 peptidylprolyl isomerase [EC:5.2.1.8]
Peptidyl-prolyl cis-trans isomerase n=2 Tax=Microbacterium RepID=H8E2Y3_9MICO
scnpilot_solids1_trim150_scaffold_35_166
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

157614..158609
DNA (996bp) protein (332aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000377A6C8 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL18687.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
transcriptional regulator; K13572 proteasome accessory factor B rbh
scnpilot_solids1_trim150_scaffold_35_167
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

158606..159592
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000345C5E0 rbh
Transcriptional regulator {ECO:0000313|EMBL:EYT59255.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
transcriptional regulator; K13573 proteasome accessory factor C
scnpilot_solids1_trim150_scaffold_35_168
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

159623..159883
DNA (261bp) protein (87aa)
Sec-independent protein translocase protein TatA n=1 Tax=Microbacterium sp. TS-1 RepID=U2YQ78_9MICO
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
sec-independent protein secretion pathway components; K03116 sec-independent protein translocase protein TatA
scnpilot_solids1_trim150_scaffold_35_169
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

159938..160702
DNA (765bp) protein (255aa)
preprotein translocase subunit TatC n=1 Tax=Microbacterium barkeri RepID=UPI000368F159 rbh
sec-independent protein secretion pathway component TatC; K03118 sec-independent protein translocase protein TatC rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_35_170
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

160699..163173
DNA (2475bp) protein (825aa)
superfamily II RNA helicase; K03727 ATP-dependent RNA helicase HelY [EC:3.6.4.-] rbh
RNA helicase n=1 Tax=Microbacterium barkeri RepID=UPI0002D2C9C5 rbh
Ski2-like helicase {ECO:0000313|EMBL:KJL18691.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
scnpilot_solids1_trim150_scaffold_35_171
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

163170..164705
DNA (1536bp) protein (512aa)
apolipoprotein N-acyltransferase; K03820 apolipoprotein N-acyltransferase [EC:2.3.1.-] rbh
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KIC2_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EQM74468.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
scnpilot_solids1_trim150_scaffold_35_172
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(164707..165090)
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003146EE1
RNA polymerase-binding protein RbpA {ECO:0000256|HAMAP-Rule:MF_01483}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_35_173
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(165207..165971)
DNA (765bp) protein (255aa)
glycerophosphoryl diester phosphodiesterase; K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002DDDDF2 rbh
Contig_2, whole genome shotgun sequence {ECO:0000313|EMBL:KIP95402.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
scnpilot_solids1_trim150_scaffold_35_174
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(165968..166897)
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002FFCF90 rbh
Modulator of FtsH protease HflK {ECO:0000313|EMBL:KJL18695.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
secreted protein rbh
scnpilot_solids1_trim150_scaffold_35_175
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(166906..167367)
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034ACE1C
Uncharacterized protein {ECO:0000313|EMBL:KJQ55859.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein
Displaying items 151-180 of 188 in total

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