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scnpilot_solids1_trim150_scaffold_35

Search features with annotation key words

Displaying items 91-120 of 188 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_35_89
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

81709..82791
DNA (1083bp) protein (361aa)
CDP-diglyceride synthetase; K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41] rbh
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000345749D rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_35_90
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

82791..83375
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KI31_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EQM74388.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
permease of the major facilitator superfamily
scnpilot_solids1_trim150_scaffold_35_91
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

83441..84100
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KFY4_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EQM74389.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_35_92
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

84110..84397
DNA (288bp) protein (96aa)
ATP/GTP-binding protein n=1 Tax=Microbacterium yannicii RepID=UPI0002E1C619
ATP/GTP-binding protein {ECO:0000313|EMBL:KDA05501.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
ATP/GTP-binding protein
scnpilot_solids1_trim150_scaffold_35_93
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

84394..85110
DNA (717bp) protein (239aa)
alpha/beta hydrolase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034A3C14 rbh
Predicted hydrolase of the alpha/beta superfamily {ECO:0000313|EMBL:CDK01404.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
hydrolase of the alpha/beta superfamily; K07018 rbh
scnpilot_solids1_trim150_scaffold_35_94
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(85111..86190)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K3F7_9MICO rbh
Pheromone autoinducer 2 transporter {ECO:0000313|EMBL:KJL18614.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
permease rbh
scnpilot_solids1_trim150_scaffold_35_95
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

86352..88145
DNA (1794bp) protein (598aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034824B4 rbh
Glycosyl transferase {ECO:0000313|EMBL:KDA05503.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
glycosyltransferase rbh
scnpilot_solids1_trim150_scaffold_35_96
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

88142..89074
DNA (933bp) protein (311aa)
thioredoxin n=1 Tax=Microbacterium sp. B19 RepID=UPI00034934FD rbh
Contig_2, whole genome shotgun sequence {ECO:0000313|EMBL:KIP95470.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
thioredoxin domain-containing protein; K05838 putative thioredoxin rbh
scnpilot_solids1_trim150_scaffold_35_97
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(89094..91301)
DNA (2208bp) protein (736aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
1,4-alpha-glucan branching enzyme; K00700 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] rbh
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003060FE2 rbh
scnpilot_solids1_trim150_scaffold_35_98
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(91298..93277)
DNA (1980bp) protein (660aa)
Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase {ECO:0000256|HAMAP-Rule:MF_02124}; Short=GMPMT {ECO:0000256|HAMAP-Rule:MF_02124};; EC=2.4.99.16 {ECO:0000256|HAMAP-Rule:MF_02124};; (1->4)-alpha-D-glucan:maltose-1-phosphate alpha-D-maltosyltransferase {ECO:0000256|HAMAP-Rule:MF_02124}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003497F09 rbh
glycosidase rbh
scnpilot_solids1_trim150_scaffold_35_99
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(93425..95494)
DNA (2070bp) protein (690aa)
Glycogen operon protein GlgX homolog {ECO:0000256|SAAS:SAAS00046872}; EC=3.2.1.- {ECO:0000256|SAAS:SAAS00055489};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
type II secretory pathway, pullulanase PulA; K02438 glycogen operon protein GlgX [EC:3.2.1.-] rbh
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000366135E rbh
scnpilot_solids1_trim150_scaffold_35_100
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

95538..96788
DNA (1251bp) protein (417aa)
Cysteine desulfurase {ECO:0000313|EMBL:KJL17794.1}; EC=2.8.1.7 {ECO:0000313|EMBL:KJL17794.1};; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
cysteine sulfinate desulfinase/cysteine desulfurase; K04487 cysteine desulfurase [EC:2.8.1.7] rbh
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KI41_9MICO rbh
scnpilot_solids1_trim150_scaffold_35_101
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

96883..97980
DNA (1098bp) protein (366aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
mnmA; tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase; K00566 tRNA-specific 2-thiouridylase [EC:2.8.1.-] rbh
thiouridylase n=1 Tax=Microbacterium barkeri RepID=UPI00030681C2 rbh
scnpilot_solids1_trim150_scaffold_35_102
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

98036..100351
DNA (2316bp) protein (772aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
ligA; NAD-dependent DNA ligase; K01972 DNA ligase (NAD+) [EC:6.5.1.2] rbh
DNA ligase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000344D159 rbh
scnpilot_solids1_trim150_scaffold_35_103
Streptomyces sp. PVA 94-07, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

100377..100811
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Streptomyces sp. S4 RepID=UPI00024947B9
Histone acetyltransferase HPA2-related acetyltransferase {ECO:0000313|EMBL:ESQ04131.1}; TaxID=1223307 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. PVA 94-07.;"
Histone acetyltransferase HPA2-related acetyltransferase
scnpilot_solids1_trim150_scaffold_35_104
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

100943..101692
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003610178 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL35874.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_35_105
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(101829..103739)
DNA (1911bp) protein (637aa)
ATP-dependent RNA helicase DeaD {ECO:0000256|HAMAP-Rule:MF_00964}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00964};; Cold-shock DEAD box protein A {ECO:0000256|HAMAP-Rule:MF_00964}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002EFDD21 rbh
ATP-dependent RNA helicase rbh
scnpilot_solids1_trim150_scaffold_35_106
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(103803..105503)
DNA (1701bp) protein (567aa)
Long-chain fatty acid--CoA ligase {ECO:0000313|EMBL:EQM74403.1}; EC=6.2.1.3 {ECO:0000313|EMBL:EQM74403.1};; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
fadD; acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3] rbh
Long-chain fatty acid--CoA ligase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KI56_9MICO rbh
scnpilot_solids1_trim150_scaffold_35_107
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

105602..105862
DNA (261bp) protein (87aa)
Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit; K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KG11_9MICO
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_35_108
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

105877..107391
DNA (1515bp) protein (505aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
gatA; Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] rbh
glutamyl-tRNA amidotransferase subunit A n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034D8D7B rbh
scnpilot_solids1_trim150_scaffold_35_109
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

107391..108902
DNA (1512bp) protein (504aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
gatB; Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] rbh
aspartyl/glutamyl-tRNA amidotransferase subunit B n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003490B92 rbh
scnpilot_solids1_trim150_scaffold_35_110
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(108947..109540)
DNA (594bp) protein (198aa)
TetR family transcriptional regulator n=1 Tax=Ruania albidiflava RepID=UPI0003B6115B
HTH-type transcriptional regulator AcrR {ECO:0000313|EMBL:KJL35861.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
tetr family transcriptional regulator
scnpilot_solids1_trim150_scaffold_35_111
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(109606..109980)
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Ruania albidiflava RepID=UPI0003B40ADE
Uncharacterized protein {ECO:0000313|EMBL:KJL35860.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_35_112
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

110107..111360
DNA (1254bp) protein (418aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
nucleotidyltransferase/DNA polymerase; K02346 DNA polymerase IV [EC:2.7.7.7] rbh
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000347852C rbh
scnpilot_solids1_trim150_scaffold_35_113
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

111398..111715
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KI72_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EQM74408.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
scnpilot_solids1_trim150_scaffold_35_114
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

111699..112280
DNA (582bp) protein (194aa)
adenylate kinase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B5EE01
Aminobenzoate synthetase {ECO:0000313|EMBL:KEP76092.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
adenylate kinase
scnpilot_solids1_trim150_scaffold_35_115
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(112283..112762)
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003467045
Uncharacterized protein {ECO:0000313|EMBL:KDA05516.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_35_116
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(112759..113049)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E06DF6
ATP-dependent Clp protease adapter protein ClpS {ECO:0000256|HAMAP-Rule:MF_00302}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein; K06891 ATP-dependent Clp protease adaptor protein ClpS
scnpilot_solids1_trim150_scaffold_35_117
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(113046..113390)
DNA (345bp) protein (115aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NDK0_MICTS
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:BAJ76266.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
scnpilot_solids1_trim150_scaffold_35_118
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

113524..115083
DNA (1560bp) protein (520aa)
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B353AE rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL18347.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein
Displaying items 91-120 of 188 in total

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