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scnpilot_solids1_trim150_scaffold_35

Search features with annotation key words

Displaying items 61-90 of 188 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_35_59
Gordonia bronchialis, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(52711..53391)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Gordonia bronchialis (strain ATCC 25592 / DSM 43247 / JCM 3198 / NCTC 10667) RepID=D0L5B3_GORB4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY23371.1}; TaxID=526226 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia bronchialis (strain ATCC 25592 / DSM 43247 / JCM 3198 / NCTC; 10667) (Rhodococcus bronchialis).;"
scnpilot_solids1_trim150_scaffold_35_60
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(53388..55766)
DNA (2379bp) protein (793aa)
Uncharacterized protein {ECO:0000313|EMBL:KDA05880.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
scnpilot_solids1_trim150_scaffold_35_61
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(55851..56843)
DNA (993bp) protein (331aa)
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic acid synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Sulfur insertion protein LipA {ECO:0000256|HAMAP-Rule:MF_00206}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
lipA; lipoate synthase; K03644 lipoic acid synthetase [EC:2.8.1.8] rbh
radical SAM protein n=1 Tax=Microbacterium barkeri RepID=UPI0002F41398 rbh
scnpilot_solids1_trim150_scaffold_35_62
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(56840..57484)
DNA (645bp) protein (215aa)
Octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262}; EC=2.3.1.181 {ECO:0000256|HAMAP-Rule:MF_00013, ECO:0000256|PIRNR:PIRNR016262};; Lipoate-protein ligase B {ECO:0000256|HAMAP-Rule:MF_00013}; Lipoyl/octanoyl transferase {ECO:0000256|HAMAP-Rule:MF_00013}; Octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase {ECO:0000256|HAMAP-Rule:MF_00013}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium aza
lipB; lipoate-protein ligase B; K03801 lipoyl(octanoyl) transferase [EC:2.3.1.181] rbh
Octanoyltransferase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K3B4_9MICO rbh
scnpilot_solids1_trim150_scaffold_35_63
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

57588..58172
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002FCAA9E
Uncharacterized protein {ECO:0000313|EMBL:KDA05732.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
transcriptional regulator
scnpilot_solids1_trim150_scaffold_35_64
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


58233..59786
DNA (1554bp) protein (518aa)
Signal recognition particle protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KHZ1_9MICO rbh
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
ffh; signal recognition particle GTPase; K03106 signal recognition particle subunit SRP54 rbh
scnpilot_solids1_trim150_scaffold_35_65
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(59851..61698)
DNA (1848bp) protein (616aa)
membrane protein n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI00028884CE rbh
Membrane protein {ECO:0000313|EMBL:KDA05730.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_35_66
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(61838..63358)
DNA (1521bp) protein (507aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
glpK; glycerol kinase; K00864 glycerol kinase [EC:2.7.1.30] rbh
glycerol kinase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000344E158 rbh
scnpilot_solids1_trim150_scaffold_35_67
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(63409..65121)
DNA (1713bp) protein (571aa)
Aerobic glycerol-3-phosphate dehydrogenase {ECO:0000313|EMBL:KJL18586.1}; EC=1.1.5.3 {ECO:0000313|EMBL:KJL18586.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KFV2_9MICO rbh
glycerol-3-phosphate dehydrogenase rbh
scnpilot_solids1_trim150_scaffold_35_68
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

65216..66187
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000304ED7C rbh
Deoxyribonucleoside regulator {ECO:0000313|EMBL:KJL18587.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
transcriptional regulator, DeoR family rbh
scnpilot_solids1_trim150_scaffold_35_69
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(66189..67493)
DNA (1305bp) protein (435aa)
hypothetical protein; K06048 carboxylate-amine ligase [EC:6.3.-.-] rbh
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000371D7BC rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_35_70
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


67544..67972
DNA (429bp) protein (143aa)
30S ribosomal protein S16 n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KD05_9MICO
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
rpsP; ribosomal protein S16; K02959 small subunit ribosomal protein S16
scnpilot_solids1_trim150_scaffold_35_71
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

67979..68209
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000367D1BD
UPF0109 protein RU09_14935 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
RNA-binding protein; K06960
scnpilot_solids1_trim150_scaffold_35_72
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

68211..68765
DNA (555bp) protein (185aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000344DC1B
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00055369}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
rimM; RimM protein; K02860 16S rRNA processing protein RimM
scnpilot_solids1_trim150_scaffold_35_73
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

68779..69498
DNA (720bp) protein (240aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
trmD; tRNA-(guanine-N1)-methyltransferase; K00554 tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
tRNA (guanine-N1)-methyltransferase n=1 Tax=Microbacterium barkeri RepID=UPI0002E54C68 rbh
scnpilot_solids1_trim150_scaffold_35_74
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(69534..70316)
DNA (783bp) protein (261aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
methionine aminopeptidase; K01265 methionyl aminopeptidase [EC:3.4.11.18] rbh
methionine aminopeptidase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034D77DD rbh
scnpilot_solids1_trim150_scaffold_35_75
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

70418..70903
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002D95DD6
Uncharacterized protein {ECO:0000313|EMBL:KJL18595.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
permease of the major facilitator superfamily
scnpilot_solids1_trim150_scaffold_35_76
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


71071..71418
DNA (348bp) protein (116aa)
50S ribosomal protein L19 n=1 Tax=Microbacterium yannicii RepID=UPI0003033D10
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
rplS; ribosomal protein L19; K02884 large subunit ribosomal protein L19
scnpilot_solids1_trim150_scaffold_35_77
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

71540..72277
DNA (738bp) protein (246aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
signal peptidase I; K03100 signal peptidase I [EC:3.4.21.89]
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K3E2_9MICO rbh
scnpilot_solids1_trim150_scaffold_35_78
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

72274..72936
DNA (663bp) protein (221aa)
Ribonuclease {ECO:0000256|RuleBase:RU003515}; EC=3.1.26.- {ECO:0000256|RuleBase:RU003515};; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
ribonuclease HII; K03470 ribonuclease HII [EC:3.1.26.4]
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002F0BA14 rbh
scnpilot_solids1_trim150_scaffold_35_79
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

72949..73275
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KI17_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL17815.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_35_80
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

73399..73761
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034500D9
UPF0102 protein D514_0110970 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
endonuclease distantly; K07460 putative endonuclease
scnpilot_solids1_trim150_scaffold_35_81
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

73758..75287
DNA (1530bp) protein (510aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000348EB03 rbh
Uncharacterized protein {ECO:0000313|EMBL:EYT59337.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
ATPase with chaperone activity; K07391 magnesium chelatase family protein rbh
scnpilot_solids1_trim150_scaffold_35_82
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

75308..76462
DNA (1155bp) protein (385aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034C58E0 rbh
Contig_39, whole genome shotgun sequence {ECO:0000313|EMBL:KIP88008.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
Rossmann fold nucleotide-binding protein; K04096 DNA processing protein rbh
scnpilot_solids1_trim150_scaffold_35_83
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

76587..77489
DNA (903bp) protein (301aa)
Tyrosine recombinase XerC n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KD25_9MICO rbh
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
integrase; K03733 integrase/recombinase XerC rbh
scnpilot_solids1_trim150_scaffold_35_84
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(77601..78188)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KI25_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KDA05494.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_35_85
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


78504..79391
DNA (888bp) protein (296aa)
30S ribosomal protein S2 n=1 Tax=Microbacterium barkeri RepID=UPI000377998C rbh
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
rpsB; ribosomal protein S2; K02967 small subunit ribosomal protein S2 rbh
scnpilot_solids1_trim150_scaffold_35_86
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

79433..80260
DNA (828bp) protein (276aa)
elongation factor Ts n=1 Tax=Microbacterium barkeri RepID=UPI00031308CC rbh
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
tsf; translation elongation factor Ts; K02357 elongation factor Ts rbh
scnpilot_solids1_trim150_scaffold_35_87
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

80359..81075
DNA (717bp) protein (239aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
pyrH; uridylate kinase; K09903 uridylate kinase [EC:2.7.4.22] rbh
uridylate kinase n=1 Tax=Microbacterium barkeri RepID=UPI000305EE52 rbh
scnpilot_solids1_trim150_scaffold_35_88
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

81149..81703
DNA (555bp) protein (185aa)
ribosome recycling factor n=1 Tax=Microbacterium barkeri RepID=UPI0002DC2714 rbh
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
frr; ribosome recycling factor; K02838 ribosome recycling factor
Displaying items 61-90 of 188 in total

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