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scnpilot_solids1_trim150_scaffold_35

Search features with annotation key words

Displaying items 31-60 of 188 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_35_trna_2
unknown

Not on your lists

25108..25180
DNA (73bp)
transferRNA Glu
scnpilot_solids1_trim150_scaffold_35_30
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25263..25976)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AIG7_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD86585.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
PAP2_like_2 multi-domain protein
scnpilot_solids1_trim150_scaffold_35_31
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(26067..27317)
DNA (1251bp) protein (417aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002DBD7F0 rbh
major facilitator superfamily protein
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_35_32
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27319..27855)
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034B6228
Uncharacterized protein {ECO:0000313|EMBL:EYT59392.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
regulatory protein ArsR
scnpilot_solids1_trim150_scaffold_35_33
unknown

Not on your lists

comp(27886..28020)
DNA (135bp) protein (45aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_35_34
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28106..29095
DNA (990bp) protein (330aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002F25A85 rbh
Tellurium resistance protein TerC {ECO:0000313|EMBL:KDA05754.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein; K05794 tellurite resistance protein TerC rbh
scnpilot_solids1_trim150_scaffold_35_35
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29235..30656
DNA (1422bp) protein (474aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
leuC; isopropylmalate isomerase large subunit (EC:4.2.1.33); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] rbh
isopropylmalate isomerase n=1 Tax=Microbacterium barkeri RepID=UPI0002FA131C rbh
scnpilot_solids1_trim150_scaffold_35_36
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30662..31258
DNA (597bp) protein (199aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01031}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01031};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01031}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
leuD; 3-isopropylmalate dehydratase small subunit; K01704 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
3-isopropylmalate dehydratase small subunit n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KCX1_9MICO rbh
scnpilot_solids1_trim150_scaffold_35_37
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31368..32732
DNA (1365bp) protein (455aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|SAAS:SAAS00085344};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
UDP-N-acetylglucosamine enolpyruvyl transferase; K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] rbh
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KHW2_9MICO rbh
scnpilot_solids1_trim150_scaffold_35_38
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

32737..33486
DNA (750bp) protein (250aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:KJL28107.1}; EC=2.3.1.- {ECO:0000313|EMBL:KJL28107.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003657A70 rbh
1-acylglycerol-3-phosphate O-acyltransferase
scnpilot_solids1_trim150_scaffold_35_39
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33476..34612
DNA (1137bp) protein (379aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
gpsA; glycerol-3-phosphate dehydrogenase; K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] rbh
glycerol-3-phosphate dehydrogenase n=1 Tax=Microbacterium barkeri RepID=UPI0002E2B0EE rbh
scnpilot_solids1_trim150_scaffold_35_40
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

34596..35606
DNA (1011bp) protein (337aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
ddl; D-alanine-D-alanine ligase (EC:6.3.2.4) rbh
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000380A22F rbh
scnpilot_solids1_trim150_scaffold_35_41
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35610..36083)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003116838
Uncharacterized protein {ECO:0000313|EMBL:KDA05748.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_35_42
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36107..37120
DNA (1014bp) protein (338aa)
thiamine monophosphate kinase; K00946 thiamine-monophosphate kinase [EC:2.7.4.16] rbh
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000349D1D8 rbh
Contig_38, whole genome shotgun sequence {ECO:0000313|EMBL:KIP88139.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
scnpilot_solids1_trim150_scaffold_35_43
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(37087..37671)
DNA (585bp) protein (195aa)
N6-adenine-specific methylase; K08316 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00035CA340
Methyltransferase {ECO:0000313|EMBL:KDA05746.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
scnpilot_solids1_trim150_scaffold_35_44
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37737..39911
DNA (2175bp) protein (725aa)
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:KJL18563.1}; EC=3.6.4.12 {ECO:0000313|EMBL:KJL18563.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
recG; RecG-like helicase; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] rbh
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00031F7D04 rbh
scnpilot_solids1_trim150_scaffold_35_45
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

40001..40498
DNA (498bp) protein (166aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
coaD; phosphopantetheine adenylyltransferase; K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
phosphopantetheine adenylyltransferase n=1 Tax=Microbacterium barkeri RepID=UPI0002FA16F0
scnpilot_solids1_trim150_scaffold_35_46
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

40573..41106
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KCY1_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL17849.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
metal-binding, possibly nucleic acid-binding protein; K07040 uncharacterized protein
scnpilot_solids1_trim150_scaffold_35_47
Microbacterium sp. TS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


41109..41318
DNA (210bp) protein (70aa)
50S ribosomal protein L32 n=2 Tax=Microbacterium RepID=E8NCX7_MICTS
rpmF; 50S ribosomal protein L32; K02911 large subunit ribosomal protein L32
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1344956 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. TS-1.;"
scnpilot_solids1_trim150_scaffold_35_48
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

41324..42040
DNA (717bp) protein (239aa)
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
rnc; dsRNA-specific ribonuclease; K03685 ribonuclease III [EC:3.1.26.3] rbh
ribonuclease III n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034CF584 rbh
scnpilot_solids1_trim150_scaffold_35_49
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

42033..42926
DNA (894bp) protein (298aa)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103, ECO:0000256|SAAS:SAAS00020852}; Short=Fapy-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00103};; EC=3.2.2.23 {ECO:0000256|HAMAP-Rule:MF_00103};; DNA-(apurinic or apyrimidinic site) lyase MutM {ECO:0000256|HAMAP-Rule:MF_00103}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
formamidopyrimidine-DNA glycosylase; K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] rbh
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003469CA6 rbh
scnpilot_solids1_trim150_scaffold_35_50
Micrococcus luteus, Micrococcus, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(42877..43284)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Micrococcus luteus RepID=UPI0002E295C5
Uncharacterized protein {ECO:0000313|EMBL:EFD51990.1}; TaxID=596312 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Micrococcus.;" source="Micrococcus luteus SK58.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_35_51
Geomicrobium sp. JCM 19038, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

43338..43913
DNA (576bp) protein (192aa)
Acetyltransferase (GNAT) family protein n=1 Tax=Bacillus isronensis B3W22 RepID=K1LQR2_9BACI
Uncharacterized protein {ECO:0000313|EMBL:GAK08499.1}; TaxID=1460635 species="Bacteria; Firmicutes; Bacilli; Bacillales; Geomicrobium.;" source="Geomicrobium sp. JCM 19038.;"
acetyltransferase
scnpilot_solids1_trim150_scaffold_35_52
Rhodococcus sp. B7740, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

43910..44596
DNA (687bp) protein (229aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Saccharomonospora paurometabolica YIM 90007 RepID=G4J2M4_9PSEU
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AJW41642.1}; TaxID=1564114 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. B7740.;"
short-chain alcohol dehydrogenase
scnpilot_solids1_trim150_scaffold_35_53
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(44597..45682)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KHY0_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:EQM74343.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
histone acetyltransferase HPA2
scnpilot_solids1_trim150_scaffold_35_54
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(45679..46794)
DNA (1116bp) protein (372aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037B6BD2 rbh
Acetyltransferase (GNAT) family protein {ECO:0000313|EMBL:KJL17303.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
histone acetyltransferase HPA2 rbh
scnpilot_solids1_trim150_scaffold_35_55
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(46791..47087)
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034BAD9F
Uncharacterized protein {ECO:0000313|EMBL:KJQ52982.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
scnpilot_solids1_trim150_scaffold_35_56
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

47585..51097
DNA (3513bp) protein (1171aa)
Chromosome partition protein Smc n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KCZ0_9MICO rbh
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
smc; chromosome segregation ATPase; K03529 chromosome segregation protein rbh
scnpilot_solids1_trim150_scaffold_35_57
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

51278..52153
DNA (876bp) protein (292aa)
cell division protein FtsY n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034D1DB9 rbh
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
ftsY; signal recognition particle GTPase; K03110 fused signal recognition particle receptor
scnpilot_solids1_trim150_scaffold_35_58
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

52192..52692
DNA (501bp) protein (167aa)
Galactose-1-phosphate uridylyltransferase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KFU1_9MICO
Contig_38, whole genome shotgun sequence {ECO:0000313|EMBL:KIP88125.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
galactose-1-phosphate uridyltransferase
Displaying items 31-60 of 188 in total

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