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scnpilot_solids1_trim150_scaffold_111_90

Organism: SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 92051..92617

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.6
  • Coverage: 188.0
  • Bit_score: 344
  • Evalue 7.30e-92
def; N-formylmethionyl-tRNA deformylase; K01462 peptide deformylase [EC:3.5.1.88] similarity KEGG
DB: KEGG
  • Identity: 76.1
  • Coverage: 188.0
  • Bit_score: 307
  • Evalue 2.20e-81
  • rbh
polypeptide deformylase n=1 Tax=Microbacterium yannicii RepID=UPI0003049057 similarity UNIREF
DB: UNIREF100
  • Identity: 81.9
  • Coverage: 188.0
  • Bit_score: 332
  • Evalue 2.00e-88
  • rbh

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Taxonomy

Microbacterium sp. CH12i → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 567
GTGGCTGTTCTTCCGATCCGCATCATGGGCGATCCCGTGCTGCACTCCCCCGCGTCCGAGGTCGATGAGATCACCGACGAGATCCGCACGCTCGTCGCCGACATGTACGAGACGATGGATGCCGCGCCGGGGGTCGGGCTCGCCGCACCCCAGGTGGGCGTGCCGCTGCGCATCTACGTGTACACCTACGTCGACGACGACGATCAGCCGTGGCGGGGCGAGATCATCAACCCGGTGCTGTGGATGACGCCCCCTGAGCCCGGGCGTCCCGACCCCGACGAGGAGTCCGAGGGATGCCTGTCCTTCCCCGGCGAGCGGTTCCCGCTGCGCCGGTCCGACCGAGTGATGGTCACCGGCATCGACCTTCAGGGCGACCGTGTGCACATCGAGGTGGACGGCTGGCGCGCGCGCATCATGCAGCACGAGTTCGACCATCTCGACGGCATCCTGTACGTCGACCGGCTGGGCGACGGTGACGGGAGGACCGTGCAGAAGATCGCGCGCAAGCGCGGCTGGAGCCGGGGCGGCGCGAGCTGGATGCCCGGCGTCGACGATCTGGAGGGTTGA
PROTEIN sequence
Length: 189
VAVLPIRIMGDPVLHSPASEVDEITDEIRTLVADMYETMDAAPGVGLAAPQVGVPLRIYVYTYVDDDDQPWRGEIINPVLWMTPPEPGRPDPDEESEGCLSFPGERFPLRRSDRVMVTGIDLQGDRVHIEVDGWRARIMQHEFDHLDGILYVDRLGDGDGRTVQKIARKRGWSRGGASWMPGVDDLEG*