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scnpilot_solids1_trim150_scaffold_111

Search features with annotation key words

Displaying items 1-30 of 94 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_111_1
unknown

Not on your lists

1..66
DNA (66bp) protein (22aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_111_2
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

792..1232
DNA (441bp) protein (147aa)
single-stranded DNA-binding protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B59BFE
Single-stranded DNA-binding protein {ECO:0000313|EMBL:KJL39023.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
single-stranded DNA-binding protein
scnpilot_solids1_trim150_scaffold_111_3
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1242..1856
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B43B1E
Uncharacterized protein {ECO:0000313|EMBL:KJL39022.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_111_4
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1995..2519
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI00037AF1CD
Uncharacterized protein {ECO:0000313|EMBL:KJL39021.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_111_5
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2660..7525
DNA (4866bp) protein (1622aa)
hypothetical protein n=1 Tax=Leucobacter sp. UCD-THU RepID=UPI0003772DFA rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL39020.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
putative helicase
scnpilot_solids1_trim150_scaffold_111_6
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7527..8207)
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6WC80_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL39018.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_111_7
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8173..8529)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Kineosphaera limosa NBRC 100340 RepID=K6XDH6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:GAB96854.1}; TaxID=1184609 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;"
excisionase family DNA binding domain-containing protein
scnpilot_solids1_trim150_scaffold_111_8
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8607..9929)
DNA (1323bp) protein (441aa)
hypothetical protein n=1 Tax=Pseudoclavibacter faecalis RepID=UPI000378BD65
Uncharacterized protein {ECO:0000313|EMBL:EXJ52930.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
scnpilot_solids1_trim150_scaffold_111_9
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9929..10153)
DNA (225bp) protein (75aa)
Uncharacterized protein {ECO:0000313|EMBL:KJL39015.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
scnpilot_solids1_trim150_scaffold_111_10
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10416..13388)
DNA (2973bp) protein (991aa)
Glutamate-ammonia-ligase adenylyltransferase {ECO:0000256|SAAS:SAAS00086160}; EC=2.7.7.42 {ECO:0000256|SAAS:SAAS00086164};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
glutamine synthetase adenylyltransferase; K00982 glutamate-ammonia-ligase adenylyltransferase [EC:2.7.7.42] rbh
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K424_9MICO rbh
scnpilot_solids1_trim150_scaffold_111_11
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13398..14741)
DNA (1344bp) protein (448aa)
Putative glutamine synthetase 2 {ECO:0000313|EMBL:KJL35485.1}; EC=6.3.1.2 {ECO:0000313|EMBL:KJL35485.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
glnA; glutamine synthetase; K01915 glutamine synthetase [EC:6.3.1.2] rbh
Glutamine synthetase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KDP3_9MICO rbh
scnpilot_solids1_trim150_scaffold_111_12
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14738..14962)
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0003153C3D
Contig_28, whole genome shotgun sequence {ECO:0000313|EMBL:KIP89761.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_111_13
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15030..15776
DNA (747bp) protein (249aa)
Polyphosphate glucokinase {ECO:0000313|EMBL:KJL25611.1}; EC=2.7.1.63 {ECO:0000313|EMBL:KJL25611.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
glk; transcriptional regulator/sugar kinase; K00886 polyphosphate glucokinase [EC:2.7.1.63] rbh
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034AD078 rbh
scnpilot_solids1_trim150_scaffold_111_14
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16226..17965)
DNA (1740bp) protein (580aa)
DNA polymerase I, thermostable {ECO:0000313|EMBL:KJL35488.1}; EC=2.7.7.7 {ECO:0000313|EMBL:KJL35488.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
DNA polymerase I family protein with 3'-5'-exonuclease and polymerase domains; K02335 DNA polymerase I [EC:2.7.7.7] rbh
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000349E61B rbh
scnpilot_solids1_trim150_scaffold_111_15
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17970..18704)
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E6E2E2
DNA-binding protein {ECO:0000313|EMBL:KDA05576.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
Zn-ribbon protein, possibly nucleic acid-binding; K07164
scnpilot_solids1_trim150_scaffold_111_16
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

18864..19703
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000374852D rbh
2,5-diketo-D-gluconate reductase rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_111_17
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19893..20840
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GMY9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB01388.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_111_18
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20841..21614
DNA (774bp) protein (258aa)
membrane protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B3746B rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFT98271.1}; TaxID=1133849 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis ATCC 700358.;"
scnpilot_solids1_trim150_scaffold_111_trna_2
unknown

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comp(21635..21707)
DNA (73bp)
transferRNA Val
scnpilot_solids1_trim150_scaffold_111_19
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21874..24600
DNA (2727bp) protein (909aa)
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
aceE; pyruvate dehydrogenase complex, dehydrogenase (E1) component; K00163 pyruvate dehydrogenase E1 component [EC:1.2.4.1] rbh
pyruvate dehydrogenase E1 n=1 Tax=Microbacterium barkeri RepID=UPI00030AA536 rbh
scnpilot_solids1_trim150_scaffold_111_20
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24605..25822
DNA (1218bp) protein (406aa)
PucR family transcriptional regulator n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KIS3_9MICO rbh
Contig_7, whole genome shotgun sequence {ECO:0000313|EMBL:KIP94142.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
regulator of polyketide synthase expression rbh
scnpilot_solids1_trim150_scaffold_111_21
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25887..26852
DNA (966bp) protein (322aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000313|EMBL:KJL19674.1}; EC=2.3.1.39 {ECO:0000313|EMBL:KJL19674.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
fabD; (acyl-carrier-protein) S-malonyltransferase; K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] rbh
Malonyl CoA-acyl carrier protein transacylase n=2 Tax=Microbacterium RepID=H8E356_9MICO rbh
scnpilot_solids1_trim150_scaffold_111_22
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26849..27847
DNA (999bp) protein (333aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III; K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] rbh
3-oxoacyl-ACP synthase n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003744167 rbh
scnpilot_solids1_trim150_scaffold_111_23
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27911..28159
DNA (249bp) protein (83aa)
acyl carrier protein n=1 Tax=Microbacterium barkeri RepID=UPI0002D3DAB7
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
acpP; acyl carrier protein; K02078 acyl carrier protein
scnpilot_solids1_trim150_scaffold_111_24
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28238..29473
DNA (1236bp) protein (412aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
fabF; 3-oxoacyl-(acyl-carrier-protein) synthase; K09458 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] rbh
3-oxoacyl-ACP synthase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003480EDB rbh
scnpilot_solids1_trim150_scaffold_111_25
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29624..30127)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KEM8_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL20008.1}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_111_26
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30324..31097)
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00031BD3ED rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL27746.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_111_27
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31270..33267
DNA (1998bp) protein (666aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034BFFE2 rbh
Uncharacterized protein {ECO:0000313|EMBL:KDA05539.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_111_28
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33267..34523
DNA (1257bp) protein (419aa)
Proline iminopeptidase {ECO:0000313|EMBL:KJL35506.1}; EC=3.4.11.5 {ECO:0000313|EMBL:KJL35506.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003139B75 rbh
PapA; putative aminopeptidase rbh
scnpilot_solids1_trim150_scaffold_111_29
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34524..34718)
DNA (195bp) protein (65aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00037B0CDD
Uncharacterized protein {ECO:0000313|EMBL:CDJ99504.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
Displaying items 1-30 of 94 in total

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