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scnpilot_solids1_trim150_scaffold_111

Search features with annotation key words

Displaying items 31-60 of 94 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_111_trna_1
unknown

Not on your lists

comp(34772..34845)
DNA (74bp)
transferRNA Met
scnpilot_solids1_trim150_scaffold_111_30
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34871..36124)
DNA (1254bp) protein (418aa)
amidohydrolase n=1 Tax=Humibacter albus RepID=UPI0003B6531F rbh
Amidohydrolase {ECO:0000313|EMBL:KDA05909.1}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
amidohydrolase
scnpilot_solids1_trim150_scaffold_111_31
Arthrobacter crystallopoietes, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36176..36805)
DNA (630bp) protein (210aa)
membrane protein n=1 Tax=Humibacter albus RepID=UPI0003B3617D
Membrane protein {ECO:0000313|EMBL:EMY34018.1}; TaxID=1246476 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter crystallopoietes BAB-32.;"
membrane protein
scnpilot_solids1_trim150_scaffold_111_32
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36802..37353)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KI91_9MICO
Contig_2, whole genome shotgun sequence {ECO:0000313|EMBL:KIP95434.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
carbonic anhydrase/acetyltransferase, isoleucine patch superfamily
scnpilot_solids1_trim150_scaffold_111_33
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

37485..37970
DNA (486bp) protein (162aa)
DNA-binding protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E7B1A9
DNA-binding ferritin-like protein; K04047 starvation-inducible DNA-binding protein
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_111_34
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(38042..39517)
DNA (1476bp) protein (492aa)
N-substituted formamide deformylase {ECO:0000313|EMBL:KJL25583.1}; EC=3.5.1.91 {ECO:0000313|EMBL:KJL25583.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K3M0_9MICO rbh
metal-dependent hydrolase with the TIM-barrel fold; K07047 rbh
scnpilot_solids1_trim150_scaffold_111_35
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(39514..40155)
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002DADCB2 rbh
Protease synthase and sporulation protein PAI 2 {ECO:0000313|EMBL:KJL25582.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
transcriptional regulator; K07734 transcriptional regulator
scnpilot_solids1_trim150_scaffold_111_36
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(40209..41687)
DNA (1479bp) protein (493aa)
sodium:alanine symporter n=1 Tax=Microbacterium barkeri RepID=UPI0002F6FDC8 rbh
alanine transporter; K03310 alanine or glycine:cation symporter, AGCS family rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_111_37
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(41778..42788)
DNA (1011bp) protein (337aa)
formamidopyrimidine-DNA glycosylase; K05522 endonuclease VIII [EC:3.2.2.- 4.2.99.18] rbh
DNA glycosylase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KG50_9MICO rbh
DNA glycosylase {ECO:0000313|EMBL:EQM74429.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
scnpilot_solids1_trim150_scaffold_111_38
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(42790..43314)
DNA (525bp) protein (175aa)
Contig_2, whole genome shotgun sequence {ECO:0000313|EMBL:KIP95438.1}; EC=5.3.1.6 {ECO:0000313|EMBL:KIP95438.1};; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
ribose 5-phosphate isomerase RpiB; K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6]
Ribose 5-phosphate isomerase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KI87_9MICO
scnpilot_solids1_trim150_scaffold_111_39
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(43360..44544)
DNA (1185bp) protein (395aa)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323};; Heme synthase {ECO:0000256|HAMAP-Rule:MF_00323}; Protoheme ferro-lyase {ECO:0000256|HAMAP-Rule:MF_00323}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hemH; protoheme ferro-lyase; K01772 ferrochelatase [EC:4.99.1.1] rbh
Ferrochelatase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KD72_9MICO rbh
scnpilot_solids1_trim150_scaffold_111_40
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

44703..47273
DNA (2571bp) protein (857aa)
pepN; aminopeptidase N; K01256 aminopeptidase N [EC:3.4.11.2] rbh
aminopeptidase N n=1 Tax=Microbacterium barkeri RepID=UPI0002ECA96A rbh
Contig_2, whole genome shotgun sequence {ECO:0000313|EMBL:KIP95440.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
scnpilot_solids1_trim150_scaffold_111_41
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

47339..48412
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000370AA59 rbh
small-conductance mechanosensitive channel; K03442 small conductance mechanosensitive channel rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_111_42
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

48409..48795
DNA (387bp) protein (129aa)
Globin n=1 Tax=Microbacterium sp. TS-1 RepID=U2YQF9_9MICO
Group 2 truncated hemoglobin GlbO {ECO:0000313|EMBL:KJL37328.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
globin; K06886 hemoglobin
scnpilot_solids1_trim150_scaffold_111_43
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

48827..50479
DNA (1653bp) protein (551aa)
FAD-binding dehydrogenase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KI82_9MICO rbh
FAD-binding dehydrogenase {ECO:0000313|EMBL:EQM74423.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein; K07077 rbh
scnpilot_solids1_trim150_scaffold_111_44
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(50484..51155)
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000345FFDA rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL37331.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_111_45
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

51230..52114
DNA (885bp) protein (295aa)
Acyl-CoA thioesterase 2 {ECO:0000313|EMBL:KJL25572.1}; EC=3.1.2.- {ECO:0000313|EMBL:KJL25572.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
tesB; acyl-CoA thioesterase; K10805 acyl-CoA thioesterase II [EC:3.1.2.-] rbh
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000349B339 rbh
scnpilot_solids1_trim150_scaffold_111_46
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(52125..52622)
DNA (498bp) protein (166aa)
thioesterase; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-]
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000344D315
Thioesterase superfamily protein {ECO:0000313|EMBL:KJL28020.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
scnpilot_solids1_trim150_scaffold_111_47
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(52634..54313)
DNA (1680bp) protein (560aa)
ABC transporter ATP-binding protein n=1 Tax=Microbacterium barkeri RepID=UPI00031720A4 rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KHK98232.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
ATPase components of ABC transporters with duplicated ATPase domains rbh
scnpilot_solids1_trim150_scaffold_111_48
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(54412..54957)
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00037425BA
Contig_2, whole genome shotgun sequence {ECO:0000313|EMBL:KIP95447.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_111_49
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(54983..55564)
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003044061
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
single stranded DNA-binding protein; K03111 single-strand DNA-binding protein
scnpilot_solids1_trim150_scaffold_111_50
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(55693..56322)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KI76_9MICO
Homoserine/homoserine lactone efflux protein {ECO:0000313|EMBL:KJQ52916.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
RHBT family amino acid transporter; K05834 homoserine/homoserine lactone efflux protein
scnpilot_solids1_trim150_scaffold_111_51
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

56385..57092
DNA (708bp) protein (236aa)
DNA polymerase III PolC-type {ECO:0000313|EMBL:KJL28002.1}; EC=2.7.7.7 {ECO:0000313|EMBL:KJL28002.1};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
DNA polymerase III, epsilon subunit; K02342 DNA polymerase III subunit epsilon [EC:2.7.7.7]
DNA polymerase III subunit epsilon n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034C00FE rbh
scnpilot_solids1_trim150_scaffold_111_52
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

57145..57426
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00037C057A
Contig_7, whole genome shotgun sequence {ECO:0000313|EMBL:KIP94152.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
scnpilot_solids1_trim150_scaffold_111_53
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists


comp(57482..57739)
DNA (258bp) protein (86aa)
50S ribosomal protein L31 n=1 Tax=Microbacterium sp. 292MF RepID=UPI000382818B
rpmE2; ribosomal protein L31; K02909 large subunit ribosomal protein L31
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_111_54
BJP_08E140C01_10KDA_Microbacterium_68_10, Microbacterium, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

Not on your lists

comp(57824..58606)
DNA (783bp) protein (261aa)
molybdenum ABC transporter ATPase; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34] rbh
ABC transporter ATP-binding protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000346C1E3 rbh
Tax=BJP_08E140C01_10KDA_Microbacterium_68_10
scnpilot_solids1_trim150_scaffold_111_55
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(58625..59827)
DNA (1203bp) protein (401aa)
Capsular glucan synthase {ECO:0000313|EMBL:KJL20015.1}; EC=2.4.1.21 {ECO:0000313|EMBL:KJL20015.1};; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
glycosyl transferase family 1 n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034810DC rbh
glycosyltransferase rbh
scnpilot_solids1_trim150_scaffold_111_56
Microbacterium oxydans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

59856..61097
DNA (1242bp) protein (414aa)
Glucose-1-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565}; EC=2.7.7.27 {ECO:0000256|HAMAP-Rule:MF_00624, ECO:0000256|RuleBase:RU003565};; ADP-glucose pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00624}; ADP-glucose synthase {ECO:0000256|HAMAP-Rule:MF_00624}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;"
glgC; ADP-glucose pyrophosphorylase; K00975 glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] rbh
glucose-1-phosphate adenylyltransferase n=1 Tax=Microbacterium barkeri RepID=UPI0002DD1F02 rbh
scnpilot_solids1_trim150_scaffold_111_57
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

61141..61776
DNA (636bp) protein (212aa)
serB; phosphoserine phosphatase; K01079 phosphoserine phosphatase [EC:3.1.3.3] rbh
phosphoserine phosphatase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003453F4C rbh
Phosphoserine phosphatase {ECO:0000313|EMBL:EYT59053.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
scnpilot_solids1_trim150_scaffold_111_58
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(61818..62528)
DNA (711bp) protein (237aa)
3-oxoacyl-[acyl-carrier-protein] reductase FabG1 {ECO:0000313|EMBL:KJL31838.1}; EC=1.1.1.100 {ECO:0000313|EMBL:KJL31838.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
fabG; dehydrogenase with different specificities; K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] rbh
3-oxoacyl-ACP reductase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003497D30 rbh
Displaying items 31-60 of 94 in total

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