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scnpilot_solids1_trim150_scaffold_111_49

Organism: SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(54983..55564)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0003044061 similarity UNIREF
DB: UNIREF100
  • Identity: 48.1
  • Coverage: 156.0
  • Bit_score: 141
  • Evalue 6.80e-31
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.8
  • Coverage: 180.0
  • Bit_score: 157
  • Evalue 2.20e-35
single stranded DNA-binding protein; K03111 single-strand DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 36.9
  • Coverage: 187.0
  • Bit_score: 121
  • Evalue 2.30e-25

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Taxonomy

Microbacterium oxydans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 582
ATGACCATCAGGAACGACACCGTCGTCATCGCCGGGAACATCGGCAACGATCCGAGCAGGGGAGTGACCCGCACGGGCAAGCCCGTCATCAACTTCCGCGTGGCATCCACGCCCGGCTACTTCGATCAGCGCACCGGCGCATGGGTCGAGGGGGACACCAGCTGGTACGCGATCTCGGCCTTCGGCAACATCGCCGACCACGCGAAGGCATCGCTGCGCTGCGGCGATCCCGTCATCGTGGTCGGACGGATGAAGGTGCGCGAGTGGGAGGCCAACGGCAGGAAGGGAGTCGACGTCGAGATCGACGCGGACGCCATCGGGCACGACCTCAACAAGGGCACCAGCGCGTTCGCCCGCCGGGCCAAGGCTGGCAGCGGGGAGCGCTCCGCTCCGGCTGCCGGGGCACCGGAGTCGACCGGGTCGGGGATGCCCGAAGGCGGCGGGATGCCCGACGAGGGCGGGATGCCCGACGAGCCCAGCGCTGCGGAGCGCGAGGCCTGGGACGCCGAGGGGATGACCGATCCCGACGCCGATCCGGCGTCGGCCGAGGCGGATCACGAGGACGAGCTCGCGTACACGTGA
PROTEIN sequence
Length: 194
MTIRNDTVVIAGNIGNDPSRGVTRTGKPVINFRVASTPGYFDQRTGAWVEGDTSWYAISAFGNIADHAKASLRCGDPVIVVGRMKVREWEANGRKGVDVEIDADAIGHDLNKGTSAFARRAKAGSGERSAPAAGAPESTGSGMPEGGGMPDEGGMPDEPSAAEREAWDAEGMTDPDADPASAEADHEDELAYT*