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scnpilot_solids1_trim150_scaffold_666_19

Organism: SCNPILOT_SOLID_1_TRIM150_Microbacterium_69_53

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 19278..20054

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.9
  • Coverage: 255.0
  • Bit_score: 418
  • Evalue 5.40e-114
rsuA; 16S rRNA uridine-516 pseudouridylate synthase; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] similarity KEGG
DB: KEGG
  • Identity: 77.9
  • Coverage: 244.0
  • Bit_score: 379
  • Evalue 1.10e-102
  • rbh
Pseudouridine synthase n=2 Tax=Microbacterium RepID=H8E9U7_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 81.0
  • Coverage: 252.0
  • Bit_score: 409
  • Evalue 2.30e-111
  • rbh

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Taxonomy

Microbacterium sp. CH12i → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 777
ATGACGGATGCCGAGGGCGTGCGCCTGCAGAAGGCGCTGGCGAATGCCGGTGTCGCGTCCAGGCGCGTGGTGGAGCAGTACATCGTCGATGGCCGCATCCGCGTCAACGGGCGCACCGTCACCGAGCTCGGCACCCGCATCGATCCCGAGACCGACCTGATCGACGTGGACGGCACGGCCGTGCAGCTGGACGTGTCCAAGCGCTACGTCATGCTCAACAAGCCCACCGGGATCTACAGCACCATGCATGATGAGAAGGACAGACCCGACCTGCGCCGGTTCACGCGGGAGTGGCCGGAGCGGCTGTACAACGTGGGGCGTCTGGATGCCGAGACCAGCGGACTGCTGATCCTCACCAACGACGGGGACCTCGCGCACGTGCTCGCGCATCCGTCGTTCGGCGTGACCAAGGTGTACATCGCCAAGGTGGAGGGCGCGGTCACCGCGCAGACCATCGCGAAGCTCACCCGGGGCTTCGACCTGGAGGACGGTCCCATCAAGGCCGACAAGGCGCGGCTGCTGGACCAGTCGCGCGGGTCGAGCCTGGTGGAGCTCACGCTGCACTCCGGTCGCAACCGGATCGTGCGGCGCATGATGGCCGCCGTCGGGCATCCCGTCACGGAGCTCGTGCGGCGGCGGTTCGGTCCACTGCACCTGGGAACCCTCCCGGTCGGGCGCACCCGCGAACTGACTATGATCGAACGCGGCGCGCTGCTGACCCTCTCGCGCCAGGACACACCTGCGGCCGCGGGAGACGACGAGCAGGAGACCGAGTGA
PROTEIN sequence
Length: 259
MTDAEGVRLQKALANAGVASRRVVEQYIVDGRIRVNGRTVTELGTRIDPETDLIDVDGTAVQLDVSKRYVMLNKPTGIYSTMHDEKDRPDLRRFTREWPERLYNVGRLDAETSGLLILTNDGDLAHVLAHPSFGVTKVYIAKVEGAVTAQTIAKLTRGFDLEDGPIKADKARLLDQSRGSSLVELTLHSGRNRIVRRMMAAVGHPVTELVRRRFGPLHLGTLPVGRTRELTMIERGALLTLSRQDTPAAAGDDEQETE*