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scnpilot_solids1_trim150_scaffold_666

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_666_1
Nematostella vectensis, Nematostella, Actiniaria, Hexacorallia, Cnidaria, Metazoa

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comp(485..1189)
DNA (705bp) protein (235aa)
Predicted protein n=1 Tax=Nematostella vectensis RepID=A7SRA7_NEMVE
hypothetical protein
Predicted protein {ECO:0000313|EMBL:EDO33783.1}; TaxID=45351 species="Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Actiniaria; Edwardsiidae; Nematostella.;" source="Nematostella vectensis (Starlet sea anemone).;"
scnpilot_solids1_trim150_scaffold_666_2
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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1274..2251
DNA (978bp) protein (326aa)
Uncharacterized protein (Fragment) n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KAL4_9MICO rbh
Contig_36, whole genome shotgun sequence {ECO:0000313|EMBL:KIP88799.1}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_666_3
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2251..3288
DNA (1038bp) protein (346aa)
Putative hydrolase YutF {ECO:0000313|EMBL:KJL26374.1}; EC=3.-.-.- {ECO:0000313|EMBL:KJL26374.1};; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
haloacid dehalogenase n=1 Tax=Microbacterium barkeri RepID=UPI0002E0B3F4 rbh
sugar phosphatase of the HAD superfamily rbh
scnpilot_solids1_trim150_scaffold_666_4
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3495..4292
DNA (798bp) protein (266aa)
16S/23S rRNA (Cytidine-2'-O)-methyltransferase TlyA {ECO:0000313|EMBL:KJQ54820.1}; EC=2.1.1.226 {ECO:0000313|EMBL:KJQ54820.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
rRNA methylase; K06442 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K9U0_9MICO rbh
scnpilot_solids1_trim150_scaffold_666_5
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4289..5194
DNA (906bp) protein (302aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1587523 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
ppnK; sugar kinase; K00858 NAD+ kinase [EC:2.7.1.23]
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K073_9MICO rbh
scnpilot_solids1_trim150_scaffold_666_6
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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5191..6879
DNA (1689bp) protein (563aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002F01069 rbh
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
recN; ATPase; K03631 DNA repair protein RecN (Recombination protein N)
scnpilot_solids1_trim150_scaffold_666_7
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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6894..8588
DNA (1695bp) protein (565aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
pyrG; CTP synthase; K01937 CTP synthase [EC:6.3.4.2] rbh
CTP synthetase n=1 Tax=Microbacterium barkeri RepID=UPI00035CAB5A rbh
scnpilot_solids1_trim150_scaffold_666_8
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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8575..9150
DNA (576bp) protein (192aa)
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:KJQ54824.1}; EC=3.6.1.13 {ECO:0000313|EMBL:KJQ54824.1};; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
NTP pyrophosphohydrolase including oxidative damage repair enzyme; K01515 ADP-ribose pyrophosphatase [EC:3.6.1.13]
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000307C72F
scnpilot_solids1_trim150_scaffold_666_9
Microbacterium foliorum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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9152..10054
DNA (903bp) protein (301aa)
Tyrosine recombinase XerD n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KM08_9MICO rbh
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=104336 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium foliorum.;"
xerD; site-specific recombinase XerD; K04763 integrase/recombinase XerD rbh
scnpilot_solids1_trim150_scaffold_666_10
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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10198..11748
DNA (1551bp) protein (517aa)
amino acid permease n=1 Tax=Brevibacterium linens RepID=UPI000050F7D9 rbh
Putative amino acid permease YhdG {ECO:0000313|EMBL:KJL26470.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
amino acid/polyamine/organocation transporter APC superfamily rbh
scnpilot_solids1_trim150_scaffold_666_11
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11768..12484
DNA (717bp) protein (239aa)
Transcriptional regulator, GntR family n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SJV7_NOCSJ
Putative L-lactate dehydrogenase operon regulatory protein {ECO:0000313|EMBL:KJL32518.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
GntR family transcriptional regulator; K05799 GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
scnpilot_solids1_trim150_scaffold_666_12
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12481..13875
DNA (1395bp) protein (465aa)
Glutamine synthetase {ECO:0000313|EMBL:KJL32519.1}; EC=6.3.1.2 {ECO:0000313|EMBL:KJL32519.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
glutamine synthetase (EC:6.3.1.2); K01915 glutamine synthetase [EC:6.3.1.2] rbh
glutamate--ammonia ligase n=1 Tax=Kocuria sp. UCD-OTCP RepID=UPI000363AAB5 rbh
scnpilot_solids1_trim150_scaffold_666_13
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13878..15272
DNA (1395bp) protein (465aa)
Phenylacetaldehyde dehydrogenase {ECO:0000313|EMBL:KJL26473.1}; EC=1.2.1.39 {ECO:0000313|EMBL:KJL26473.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
Betaine-aldehyde dehydrogenase n=1 Tax=Actinoplanes sp. N902-109 PF9_9ACTO">RepID=R4LPF9_9ACTO rbh
betaine-aldehyde dehydrogenase rbh
scnpilot_solids1_trim150_scaffold_666_14
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15305..16084
DNA (780bp) protein (260aa)
3-oxoacyl-[acyl-carrier-protein] reductase FabG {ECO:0000313|EMBL:KJL32521.1}; EC=1.1.1.100 {ECO:0000313|EMBL:KJL32521.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
short-chain dehydrogenase n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00037E5DFD
short-chain dehydrogenase/reductase SDR
scnpilot_solids1_trim150_scaffold_666_15
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16077..16823
DNA (747bp) protein (249aa)
Putative glutamine amidotransferase {ECO:0000313|EMBL:KJL32522.1}; EC=2.4.2.- {ECO:0000313|EMBL:KJL32522.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
Peptidase C26 n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SJV3_NOCSJ
peptidase C26
scnpilot_solids1_trim150_scaffold_666_16
Microbacterium sp. UCD-TDU, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16878..17768
DNA (891bp) protein (297aa)
Chromosome partitioning ATPase n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KRX7_9MICO rbh
Chromosome partitioning protein {ECO:0000313|EMBL:EYT58800.1}; TaxID=1247714 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. UCD-TDU.;"
parA; ATPase; K03496 chromosome partitioning protein rbh
scnpilot_solids1_trim150_scaffold_666_17
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17752..18606
DNA (855bp) protein (285aa)
Chromosome segregation protein ScpA n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KPZ6_9MICO rbh
Segregation and condensation protein A {ECO:0000313|EMBL:KJQ54831.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
hypothetical protein; K05896 segregation and condensation protein A rbh
scnpilot_solids1_trim150_scaffold_666_18
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18596..19210
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KMS1_9MICO rbh
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
transcriptional regulator containing the HTH domain; K06024 segregation and condensation protein B
scnpilot_solids1_trim150_scaffold_666_19
Microbacterium sp. CH12i, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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19278..20054
DNA (777bp) protein (259aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;"
rsuA; 16S rRNA uridine-516 pseudouridylate synthase; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] rbh
Pseudouridine synthase n=2 Tax=Microbacterium RepID=H8E9U7_9MICO rbh
scnpilot_solids1_trim150_scaffold_666_20
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20051..21163
DNA (1113bp) protein (371aa)
tyrA; prephenate dehydrogenase; K04517 prephenate dehydrogenase [EC:1.3.1.12] rbh
prephenate dehydrogenase n=1 Tax=Microbacterium barkeri RepID=UPI0003009457 rbh
Prephenate dehydrogenase {ECO:0000313|EMBL:KJQ54834.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
scnpilot_solids1_trim150_scaffold_666_21
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21156..21851
DNA (696bp) protein (232aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
cmk; cytidylate kinase; K00945 cytidylate kinase [EC:2.7.4.14]
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002F60E24 rbh
scnpilot_solids1_trim150_scaffold_666_22
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21844..23364
DNA (1521bp) protein (507aa)
GTP-binding protein Der n=1 Tax=Microbacterium barkeri RepID=UPI000318D305 rbh
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
engA; GTPase; K03977 GTP-binding protein rbh
scnpilot_solids1_trim150_scaffold_666_23
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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23512..24378
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034832F4 rbh
Uncharacterized protein {ECO:0000313|EMBL:EQM80487.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
NTP pyrophosphohydrolase including oxidative damage repair enzyme
scnpilot_solids1_trim150_scaffold_666_24
Microbacterium sp. SA39, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24676..24891)
DNA (216bp) protein (72aa)
Uncharacterized protein {ECO:0000313|EMBL:KJQ52782.1}; TaxID=1263625 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SA39.;"
Displaying 24 items

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