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scnpilot_solids1_trim150_scaffold_2126

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2126_1
Caldatribacterium californiense, Caldatribacterium, Atribacteria, Bacteria

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comp(3..734)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2M8C4_9ACTO
putative sugar ABC transporter permease; K10440 ribose transport system permease protein
Tax=Caldatribacterium californiense
scnpilot_solids1_trim150_scaffold_2126_2
Mumia flava, Mumia, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(731..2236)
DNA (1506bp) protein (502aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2MS88_9ACTO rbh
Sugar ABC transporter ATPase {ECO:0000313|EMBL:KHL17102.1}; TaxID=1348852 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
rbsA; ABC transporter, ATP binding subunit (putative high-affinity D-ribose transport)
scnpilot_solids1_trim150_scaffold_2126_3
Caldatribacterium californiense, Caldatribacterium, Atribacteria, Bacteria

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comp(2233..3408)
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2NZF1_9ACTO rbh
ABC transporter substrate-binding protein
Tax=Caldatribacterium californiense
scnpilot_solids1_trim150_scaffold_2126_4

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comp(3417..4382)
DNA (966bp) protein (322aa)
Multiple sugar transport system permease protein n=1 Tax=uncultured prokaryote RepID=H5SKT5_9ZZZZ
Multiple sugar transport system permease protein {ECO:0000313|EMBL:BAL56771.1}; TaxID=198431 species="unclassified sequences; environmental samples.;" source="uncultured prokaryote.;"
inner-membrane translocator
scnpilot_solids1_trim150_scaffold_2126_5
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(4379..5581)
DNA (1203bp) protein (401aa)
peptidase M20; K01438 acetylornithine deacetylase [EC:3.5.1.16]
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2NDD0_9ACTO rbh
Peptidase M20 {ECO:0000313|EMBL:ADV61563.1}; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
scnpilot_solids1_trim150_scaffold_2126_6
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

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comp(5578..6045)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2MV27_9ACTO
FMN-binding pyridoxamine 5'-phosphate oxidase-like protein
Tax=RBG_16_Chloroflexi_54_18_curated
scnpilot_solids1_trim150_scaffold_2126_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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6087..6908
DNA (822bp) protein (274aa)
Transcriptional regulator, IclR family, C-terminal domain protein n=1 Tax=Streptomyces turgidiscabies Car8 RepID=L7ET11_9ACTO
IclR family transcriptional regulator
Tax=RBG_16_Actinobacteria_68_12_curated
scnpilot_solids1_trim150_scaffold_2126_8
Vibrio cholerae, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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7029..8495
DNA (1467bp) protein (489aa)
hypothetical protein n=1 Tax=Nocardiopsis gilva RepID=UPI00034AA469 rbh
Uncharacterized protein {ECO:0000313|EMBL:KFE33067.1}; TaxID=666 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio cholerae.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2126_9
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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8458..9330
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2NE38_9ACTO
IclR family transcriptional regulator; K13641 IclR family transcriptional regulator, acetate operon repressor
Transcriptional regulator, IclR family {ECO:0000313|EMBL:ADB53088.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Displaying 9 items

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