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scnpilot_solids1_trim150_scaffold_2239

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2239_1
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(141..1352)
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E772_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHN10447.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2239_2
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(1522..3033)
DNA (1512bp) protein (504aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; K03885 NADH dehydrogenase [EC:1.6.99.3]
FAD-dependent pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01ZH7_SOLUE
FAD-dependent pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:ABJ84938.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
scnpilot_solids1_trim150_scaffold_2239_3
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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3101..4501
DNA (1401bp) protein (467aa)
aldehyde dehydrogenase; K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]
Aldehyde Dehydrogenase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TLP1_9CHLR
Aldehyde Dehydrogenase {ECO:0000313|EMBL:EFH86691.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
scnpilot_solids1_trim150_scaffold_2239_4
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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4594..5463
DNA (870bp) protein (290aa)
Exodeoxyribonuclease III {ECO:0000313|EMBL:CEL21152.1}; EC=3.1.11.2 {ECO:0000313|EMBL:CEL21152.1};; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
exodeoxyribonuclease III n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026290C4 rbh
Exodeoxyribonuclease III Xth rbh
scnpilot_solids1_trim150_scaffold_2239_5
Streptomyces roseochromogenus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(5533..6063)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6KQR8_STRRC
Uncharacterized protein {ECO:0000313|EMBL:EST34363.1}; TaxID=1352936 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces roseochromogenus subsp. oscitans DS 12.976.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2239_6
Streptomyces sp. MUSC164, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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6153..7031
DNA (879bp) protein (293aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Streptomyces violaceusniger Tu 4113 RepID=G2NTM2_STRVO rbh
RNA polymerase sigma 70 {ECO:0000313|EMBL:KKA41445.1}; TaxID=1354891 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. MUSC164.;"
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily rbh
scnpilot_solids1_trim150_scaffold_2239_7
Streptomyces mutabilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(7028..7579)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Saccharomonospora marina XMU15 RepID=H5X7V9_9PSEU
Carboxymuconolactone decarboxylase {ECO:0000313|EMBL:KFG71572.1}; TaxID=67332 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces mutabilis.;"
Carboxymuconolactone decarboxylase
scnpilot_solids1_trim150_scaffold_2239_8
unknown

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comp(7782..8177)
DNA (396bp) protein (132aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2239_9
unknown

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comp(8196..8498)
DNA (303bp) protein (101aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2239_trna_2
unknown

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comp(8630..8713)
DNA (84bp)
transferRNA Leu
scnpilot_solids1_trim150_scaffold_2239_10

Not on your lists

8794..9306
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F4K0_CONWI
Uncharacterized protein {ECO:0000313|EMBL:KKL16860.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2239_trna_1
unknown

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comp(9441..9524)
DNA (84bp)
transferRNA Leu
scnpilot_solids1_trim150_scaffold_2239_11
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(9554..10228)
DNA (675bp) protein (225aa)
Phosphoesterase PA-phosphatase related protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F2F6_CONWI
phosphoesterase PA-phosphatase-like protein
Phosphoesterase PA-phosphatase related protein {ECO:0000313|EMBL:ADB52222.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids1_trim150_scaffold_2239_12
unknown

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comp(10280..10606)
DNA (327bp) protein (109aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2239_13
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(10696..12801)
DNA (2106bp) protein (702aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
Sensory transduction histidine kinase n=1 Tax=Patulibacter medicamentivorans RepID=H0E480_9ACTN rbh
integral membrane sensor signal transduction histidine kinase rbh
scnpilot_solids1_trim150_scaffold_2239_14
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(12798..13457)
DNA (660bp) protein (220aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1V2_CONWI
two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ADB54133.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids1_trim150_scaffold_2239_15
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(13469..14287)
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1W3_CONWI rbh
hypothetical protein; K01992 ABC-2 type transport system permease protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADB54144.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids1_trim150_scaffold_2239_16
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(14284..15282)
DNA (999bp) protein (333aa)
ABC transporter related protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1W2_CONWI rbh
ABC transporter; K09687 antibiotic transport system ATP-binding protein rbh
ABC transporter related protein {ECO:0000313|EMBL:ADB54143.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids1_trim150_scaffold_2239_17
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(15297..16490)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1W1_CONWI rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADB54142.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids1_trim150_scaffold_2239_18
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(16594..17484)
DNA (891bp) protein (297aa)
membrane protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B48BFE
hypothetical protein; K11939 inner membrane transporter RhtA
Uncharacterized protein {ECO:0000313|EMBL:ADL46497.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
Displaying 20 items

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