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scnpilot_solids1_trim150_scaffold_2280

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2280_1
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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2..1564
DNA (1563bp) protein (521aa)
MMPL domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F5V6_CONWI
MMPL domain protein; K06994 putative drug exporter of the RND superfamily
MMPL domain protein {ECO:0000313|EMBL:ADB52655.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids1_trim150_scaffold_2280_2
Streptomyces avermitilis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(1561..2937)
DNA (1377bp) protein (459aa)
gadB1; glutamate decarboxylase; K01580 glutamate decarboxylase [EC:4.1.1.15] rbh
Glutamate decarboxylase {ECO:0000256|RuleBase:RU361171}; EC=4.1.1.15 {ECO:0000256|RuleBase:RU361171};; TaxID=227882 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 /; NCIMB 12804 / NRRL 8165 / MA-4680).;"
glutamate decarboxylase n=1 Tax=Actinoplanes globisporus RepID=UPI0003779C23 rbh
scnpilot_solids1_trim150_scaffold_2280_3
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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comp(2991..3632)
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Streptomyces sp. CNS335 RepID=UPI00037962EB
dihydrofolate reductase
Tax=RBG_13_Acidobacteria_68_16_curated
scnpilot_solids1_trim150_scaffold_2280_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(3641..3982)
DNA (342bp) protein (114aa)
Transcriptional regulator, TraR/DksA family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F5W1_CONWI
TraR/DksA family transcriptional regulator
Transcriptional regulator, TraR/DksA family {ECO:0000313|EMBL:ADB52660.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids1_trim150_scaffold_2280_5
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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4129..6426
DNA (2298bp) protein (766aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
ATP-dependent protease La (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] rbh
Lon protease n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FBT2_CONWI rbh
scnpilot_solids1_trim150_scaffold_2280_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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6410..6718
DNA (309bp) protein (103aa)
Transcriptional regulator, HxlR family n=1 Tax=Frankia sp. CN3 RepID=G6H4J1_9ACTO
helix-turn-helix HxlR type
Tax=RBG_16_Actinobacteria_68_12_curated
scnpilot_solids1_trim150_scaffold_2280_7
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(7528..8187)
DNA (660bp) protein (220aa)
Transcriptional regulator TetR family n=1 Tax=Patulibacter medicamentivorans RepID=H0E0A8_9ACTN
Transcriptional regulator TetR family {ECO:0000313|EMBL:EHN12911.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
TetR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_2280_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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8309..8698
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FBC0_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB49289.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids1_trim150_scaffold_2280_9
Kordia algicida, Kordia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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8902..10104
DNA (1203bp) protein (401aa)
POSSIBLE HYDROLASE n=1 Tax=Kordia algicida OT-1 RepID=A9DMT4_9FLAO rbh
POSSIBLE HYDROLASE {ECO:0000313|EMBL:EDP97782.1}; TaxID=391587 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Kordia.;" source="Kordia algicida OT-1.;"
sulfatase
scnpilot_solids1_trim150_scaffold_2280_10
Mycobacterium neoaurum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10115..10804
DNA (690bp) protein (230aa)
Gap like protein n=1 Tax=Mycobacterium neoaurum VKM Ac-1815D RepID=V5X8A8_MYCNE
Gap like protein {ECO:0000313|EMBL:AHC23634.1}; TaxID=700508 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium neoaurum VKM Ac-1815D.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2280_11
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

10801..11577
DNA (777bp) protein (259aa)
Alpha/beta hydrolase fold protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F744_CONWI rbh
alpha/beta hydrolase fold protein rbh
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ADB48815.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Displaying 11 items

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