ggKbase home page

scnpilot_solids1_trim150_scaffold_2477

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2477_1
unknown

Not on your lists

3..86
DNA (84bp) protein (28aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2477_2

Not on your lists

comp(250..1071)
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B769A1
Uncharacterized protein {ECO:0000313|EMBL:KKK83083.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ion transport 2 domain-containing protein
scnpilot_solids1_trim150_scaffold_2477_3
unknown

Not on your lists

1355..1783
DNA (429bp) protein (143aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2477_4
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(1780..3222)
DNA (1443bp) protein (481aa)
multidrug MFS transporter n=1 Tax=Patulibacter americanus RepID=UPI0003B5EA46 rbh
Drug resistance transporter EmrB/QacA subfamily {ECO:0000313|EMBL:EHN12213.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
EmrB/QacA subfamily drug resistance transporter rbh
scnpilot_solids1_trim150_scaffold_2477_5
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

3332..3784
DNA (453bp) protein (151aa)
Transcriptional regulator, MarR family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZJ9_CONWI
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:ADB53837.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids1_trim150_scaffold_2477_6
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

3781..5028
DNA (1248bp) protein (416aa)
Major facilitator superfamily MFS_1 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZK0_CONWI rbh
major facilitator superfamily protein rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ADB53838.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids1_trim150_scaffold_2477_7
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(5043..6107)
DNA (1065bp) protein (355aa)
quaternary ammonium transporter n=1 Tax=Patulibacter americanus RepID=UPI0003B3A570 rbh
Substrate-binding region of ABC-type glycinee betaine transport system {ECO:0000313|EMBL:EHN12006.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
substrate-binding region of ABC-type glycine betaine transporter; K05845 osmoprotectant transport system substrate-binding protein
scnpilot_solids1_trim150_scaffold_2477_8
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6143..6868)
DNA (726bp) protein (242aa)
ABC transporter permease n=1 Tax=Patulibacter americanus RepID=UPI0003B3E6BD
ABC transporter permease; K05846 osmoprotectant transport system permease protein
Putative ABC transporter permease protein {ECO:0000313|EMBL:BAL90369.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
scnpilot_solids1_trim150_scaffold_2477_9
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(6868..7629)
DNA (762bp) protein (254aa)
ABC transporter permease n=1 Tax=Patulibacter americanus RepID=UPI0003B3A921
binding-protein-dependent transporters inner membrane component; K05846 osmoprotectant transport system permease protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADB51682.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids1_trim150_scaffold_2477_10
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(7622..8299)
DNA (678bp) protein (226aa)
ABC transporter n=1 Tax=Patulibacter americanus RepID=UPI0003B5595D
L-proline glycinee betaine ABC transport system permease protein ProV (TC 3.A.1.12.1) {ECO:0000313|EMBL:EHN12005.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
glycine betaine/L-proline ABC transporter ATPase; K05847 osmoprotectant transport system ATP-binding protein
scnpilot_solids1_trim150_scaffold_2477_11
Beutenbergia cavernae, Beutenbergia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8299..8724)
DNA (426bp) protein (142aa)
ABC transporter related n=1 Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5BXN0_BEUC1
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACQ80913.1}; TaxID=471853 species="Bacteria; Actinobacteria; Micrococcales; Beutenbergiaceae; Beutenbergia.;" source="Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432).;"
Displaying 11 items

View Taxonomy