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scnpilot_solids1_trim150_scaffold_2834

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2834_1
unknown

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2..139
DNA (138bp) protein (46aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2834_2
unknown

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227..1381
DNA (1155bp) protein (385aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2834_3
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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1490..1909
DNA (420bp) protein (140aa)
Transcriptional regulator n=1 Tax=Streptomyces sp. AA4 RepID=D9V1Z0_9ACTO
Transcriptional regulator {ECO:0000313|EMBL:EFL04584.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
transcriptional regulator
scnpilot_solids1_trim150_scaffold_2834_4
Streptomyces bingchenggensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(1857..2393)
DNA (537bp) protein (179aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=749414 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces bingchenggensis (strain BCW-1).;"
hypothetical protein n=1 Tax=Actinopolyspora mortivallis RepID=UPI0003796441
hypothetical protein
scnpilot_solids1_trim150_scaffold_2834_5
Streptomyces griseoflavus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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2419..3003
DNA (585bp) protein (195aa)
Lipoprotein n=1 Tax=Streptomyces griseoflavus Tu4000 RepID=D9XR07_9ACTO
Lipoprotein {ECO:0000313|EMBL:EFL40520.1}; TaxID=467200 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseoflavus Tu4000.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2834_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(3034..4395)
DNA (1362bp) protein (454aa)
Cobalt-zinc-cadmium resistance protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E4C0_9ACTN rbh
cation-efflux pump
Tax=RBG_16_Actinobacteria_68_12_curated
scnpilot_solids1_trim150_scaffold_2834_7
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(4392..5105)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZV8_CONWI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB49934.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids1_trim150_scaffold_2834_8
unknown

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comp(5388..5630)
DNA (243bp) protein (81aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2834_9
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(5684..6430)
DNA (747bp) protein (249aa)
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:EHN10636.1}; EC=1.1.1.100 {ECO:0000313|EMBL:EHN10636.1};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
3-oxoacyl-[acyl-carrier protein] reductase n=1 Tax=Patulibacter medicamentivorans RepID=H0E6S3_9ACTN
putative 3-oxoacyl-CoA or-ACP reductase
scnpilot_solids1_trim150_scaffold_2834_10
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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6461..7387
DNA (927bp) protein (309aa)
hypothetical protein; K11212 LPPG:FO 2-phospho-L-lactate transferase [EC:2.7.8.28]
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F5L5_CONWI
Uncharacterized protein {ECO:0000313|EMBL:ADB52564.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids1_trim150_scaffold_2834_11
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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7399..7953
DNA (555bp) protein (185aa)
2-phospho-L-lactate guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_02114}; Short=LP guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_02114};; EC=2.7.7.68 {ECO:0000256|HAMAP-Rule:MF_02114};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
2-phospho-L-lactate guanylyltransferase CofC; K14941 2-phospho-L-lactate guanylyltransferase [EC:2.7.7.68]
2-phospho-L-lactate guanylyltransferase n=1 Tax=Patulibacter medicamentivorans RepID=H0E4A6_9ACTN
scnpilot_solids1_trim150_scaffold_2834_12
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

7950..8765
DNA (816bp) protein (272aa)
F420-dependent oxidoreductase; K12234 coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:6.3.2.31 6.3.2.34]
F420-dependent oxidoreductase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F5L7_CONWI
F420-dependent oxidoreductase {ECO:0000313|EMBL:ADB52566.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids1_trim150_scaffold_2834_13
Gordonia sp. NB4-1Y, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(8784..8951)
DNA (168bp) protein (56aa)
CsbD-like family protein n=1 Tax=Gordonia sp. NB4-1Y RepID=M6ZZC9_9ACTO
CsbD-like family protein {ECO:0000313|EMBL:EMP11798.1}; TaxID=1241906 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia sp. NB4-1Y.;"
CsbD-like protein
scnpilot_solids1_trim150_scaffold_2834_14
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9088..10080)
DNA (993bp) protein (331aa)
alcohol dehydrogenase GroES-like protein; K13953 alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] rbh
Alcohol dehydrogenase GroES-like protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZZ1_RUBXD rbh
Alcohol dehydrogenase GroES-like protein {ECO:0000313|EMBL:ABG03037.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
scnpilot_solids1_trim150_scaffold_2834_15

Not on your lists

comp(10101..10298)
DNA (198bp) protein (66aa)
7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase; K11779 FO synthase [EC:2.5.1.-]
7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F5N1_CONWI
Uncharacterized protein {ECO:0000313|EMBL:KKK88286.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Displaying 15 items

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