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scnpilot_solids1_trim150_scaffold_2921

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_2921_1
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(245..715)
DNA (471bp) protein (157aa)
Cytochrome c biogenesis protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F835_CONWI
cytochrome C biogenesis protein; K02200 cytochrome c-type biogenesis protein CcmH
Cytochrome c biogenesis protein {ECO:0000313|EMBL:ADB52929.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids1_trim150_scaffold_2921_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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comp(742..1272)
DNA (531bp) protein (177aa)
redoxin domain-containing protein id=24451261 bin=RBG_19FT_COMBO_GAL15_69_19 species=Nocardioides sp. genus=Nocardioides taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
redoxin
Tax=RBG_16_Actinobacteria_68_12_curated
scnpilot_solids1_trim150_scaffold_2921_3
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(1347..1967)
DNA (621bp) protein (207aa)
Transcriptional regulator, TetR family n=1 Tax=Streptomyces ipomoeae 91-03 RepID=L1L8U6_9ACTO
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EKX69219.1}; TaxID=698759 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;"
TetR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_2921_4
unknown

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2048..2173
DNA (126bp) protein (42aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2921_trna_1
unknown

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2224..2296
DNA (73bp)
transferRNA Gly
scnpilot_solids1_trim150_scaffold_2921_5
unknown

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2363..2653
DNA (291bp) protein (97aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2921_6
Knoellia flava, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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2711..2980
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE899
Uncharacterized protein {ECO:0000313|EMBL:KGN32735.1}; TaxID=1385518 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia flava TL1.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2921_7
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

3121..3492
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FC08_CONWI
hypothetical protein; K06886 hemoglobin
Uncharacterized protein {ECO:0000313|EMBL:ADB51423.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids1_trim150_scaffold_2921_8
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(3489..4439)
DNA (951bp) protein (317aa)
Quinone oxidoreductase {ECO:0000313|EMBL:EHN12815.1}; EC=1.6.5.5 {ECO:0000313|EMBL:EHN12815.1};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
Quinone oxidoreductase n=1 Tax=Patulibacter medicamentivorans RepID=H0E0J6_9ACTN rbh
NAD(P)H quinone oxidoreductase rbh
scnpilot_solids1_trim150_scaffold_2921_9
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(4488..4835)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Rhodococcus opacus (strain B4) RepID=C1B8X4_RHOOB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH52127.1}; TaxID=632772 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (strain B4).;"
scnpilot_solids1_trim150_scaffold_2921_10
Mycobacterium mageritense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(4825..5169)
DNA (345bp) protein (115aa)
hypothetical protein n=1 Tax=Brevibacterium linens RepID=UPI0000510315
Uncharacterized protein {ECO:0000313|EMBL:CDO23732.1}; TaxID=53462 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium mageritense.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2921_11
unknown

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5195..5623
DNA (429bp) protein (143aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2921_12
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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5620..6042
DNA (423bp) protein (141aa)
anti-sigma regulatory factor, serine/threonine protein kinase; K04757 anti-sigma B factor [EC:2.7.11.1]
Putative anti-sigma regulatory factor, serine/threonine protein kinase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F8Y1_CONWI
Putative anti-sigma regulatory factor, serine/threonine protein kinase {ECO:0000313|EMBL:ADB52976.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids1_trim150_scaffold_2921_13
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

6065..6607
DNA (543bp) protein (181aa)
Phosphoesterase PA-phosphatase related protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FBF5_CONWI
phosphoesterase PA-phosphatase-like protein
Phosphoesterase PA-phosphatase related protein {ECO:0000313|EMBL:ADB49324.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids1_trim150_scaffold_2921_14
unknown

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comp(6702..6941)
DNA (240bp) protein (80aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2921_15
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7028..8227
DNA (1200bp) protein (400aa)
Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase n=1 Tax=Nocardioidaceae bacterium Broad-1 RepID=E9UNU1_9ACTO rbh
Coenzyme F420-dependent N5,N10-methylene tetrahydr omethanopterin reductase {ECO:0000313|EMBL:CDP51393.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
luciferase-like monooxygenase
scnpilot_solids1_trim150_scaffold_2921_16
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8227..8670
DNA (444bp) protein (148aa)
MarR family transcriptional regulator n=1 Tax=Glaciibacter superstes RepID=UPI0003B5AABF
Transcriptional regulator, MarR family {ECO:0000313|EMBL:CDP51394.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
MarR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_2921_17
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8663..9406
DNA (744bp) protein (248aa)
FMN reductase {ECO:0000313|EMBL:CDP51395.1}; EC=1.5.1.- {ECO:0000313|EMBL:CDP51395.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
NADH-dependent FMN reductase; K00299 FMN reductase [EC:1.5.1.38]
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B48FB8 rbh
scnpilot_solids1_trim150_scaffold_2921_18
unknown

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9614..9805
DNA (192bp) protein (64aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_2921_19
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

9844..10230
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium ASF500 RepID=V2YGC1_9FIRM
XRE family transcriptional regulator
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
scnpilot_solids1_trim150_scaffold_2921_20
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

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comp(10219..10626)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Candidatus Microthrix parvicella RN1 RepID=R4YWL3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CCM62609.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
scnpilot_solids1_trim150_scaffold_2921_21

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comp(10626..11249)
DNA (624bp) protein (208aa)
Uncharacterized protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T1B7B9_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD50080.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_2921_22
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

11431..12792
DNA (1362bp) protein (454aa)
Multidrug resistance protein B n=1 Tax=Patulibacter medicamentivorans RepID=H0E044_9ACTN rbh
Multidrug resistance protein B {ECO:0000313|EMBL:EHN13003.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
EmrB/QacA subfamily drug resistance transporter rbh
Displaying 23 items

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