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scnpilot_solids1_trim150_scaffold_663

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_663_1
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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651..3668
DNA (3018bp) protein (1006aa)
Transcriptional activator domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F3P8_CONWI rbh
transcriptional activator domain-containing protein rbh
Transcriptional activator domain protein {ECO:0000313|EMBL:ADB52413.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids1_trim150_scaffold_663_2
GWF2_TM6_30_66, TM6, Bacteria

Not on your lists

comp(3738..5711)
DNA (1974bp) protein (658aa)
PKD domain containing protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F790_CONWI
Uncharacterized protein {ECO:0000313|EMBL:KKP29803.1}; TaxID=1619078 species="Bacteria; candidate division TM6.;" source="candidate division TM6 bacterium GW2011_GWF2_30_66.;"
PKD domain-containing protein
scnpilot_solids1_trim150_scaffold_663_3

Not on your lists

comp(6025..6294)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T1C0P7_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD59715.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
scnpilot_solids1_trim150_scaffold_663_4
unknown

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comp(6622..7413)
DNA (792bp) protein (264aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_663_5
Mycobacterium cosmeticum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7521..9173
DNA (1653bp) protein (551aa)
Extracellular solute-binding , family protein 5 n=1 Tax=Mycobacterium smegmatis MKD8 RepID=L8FNB2_MYCSM
Extracellular solute-binding protein {ECO:0000313|EMBL:CDO09209.1}; Flags: Precursor;; TaxID=258533 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium cosmeticum.;"
extracellular solute-binding protein
scnpilot_solids1_trim150_scaffold_663_6
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9386..9682)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SFU0_NOCSJ
Uncharacterized protein {ECO:0000313|EMBL:KJE21961.1}; TaxID=1502723 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_663_7
unknown

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comp(10131..11111)
DNA (981bp) protein (327aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_663_8
unknown

Not on your lists

comp(11108..11635)
DNA (528bp) protein (176aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_663_9
unknown

Not on your lists

11891..13126
DNA (1236bp) protein (412aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_663_10
unknown

Not on your lists

comp(13670..13855)
DNA (186bp) protein (62aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_663_11
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14703..15488)
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI0003623897
AttM/AiiB family protein {ECO:0000313|EMBL:CCE10042.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
AttM/AiiB family protein
scnpilot_solids1_trim150_scaffold_663_12
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15485..16381)
DNA (897bp) protein (299aa)
Putative uncharacterized protein n=1 Tax=Frankia sp. (strain EAN1pec) RepID=A8KZQ2_FRASN rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABW16032.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
scnpilot_solids1_trim150_scaffold_663_13
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16411..16764
DNA (354bp) protein (118aa)
ArsR family transcriptional regulator n=1 Tax=Amycolatopsis methanolica RepID=UPI000380EC05
ArsR family transcriptional regulator {ECO:0000313|EMBL:AIJ24200.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
ArsR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_663_14
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

16831..17979
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E7C8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHN10415.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
beta-1,4-xylanase
scnpilot_solids1_trim150_scaffold_663_15
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18028..18828)
DNA (801bp) protein (267aa)
Alpha/beta hydrolase fold n=2 Tax=Micromonospora RepID=D9TA57_MICAI
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold {ECO:0000313|EMBL:ADL46370.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
scnpilot_solids1_trim150_scaffold_663_16
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18925..19575
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI000368155C
putative haloacid dehalogenase-like hydrolase
Tax=RBG_16_Gamma2_60_9_curated
scnpilot_solids1_trim150_scaffold_663_17
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

19806..20543
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0EBY7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHN08803.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
helix-turn-helix domain-containing protein
scnpilot_solids1_trim150_scaffold_663_18
unknown

Not on your lists

comp(20535..21035)
DNA (501bp) protein (167aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_663_19
Mycobacterium nebraskense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21187..21582
DNA (396bp) protein (132aa)
Toxin-antitoxin system, antitoxin component, Xre family n=3 Tax=Mycobacterium RepID=D5PEL9_9MYCO
XRE family transcriptional regulator {ECO:0000313|EMBL:KKC01822.1}; TaxID=244292 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium nebraskense.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_663_20
Cellulosimicrobium sp. MM, Cellulosimicrobium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21782..22009)
DNA (228bp) protein (76aa)
Helix-turn-helix domain protein n=1 Tax=Frankia sp. CN3 RepID=G6HFW7_9ACTO
Cro/Cl family transcriptional regulator {ECO:0000313|EMBL:KFD42924.1}; TaxID=1523621 species="Bacteria; Actinobacteria; Micrococcales; Promicromonosporaceae; Cellulosimicrobium.;" source="Cellulosimicrobium sp. MM.;"
putative transcriptional regulator, PvuIIC
scnpilot_solids1_trim150_scaffold_663_21
unknown

Not on your lists

22358..22999
DNA (642bp) protein (214aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_663_22
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

23114..23743
DNA (630bp) protein (210aa)
Transcriptional regulator, ArsR family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1A8_CONWI
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ADB52071.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids1_trim150_scaffold_663_23
unknown

Not on your lists

comp(23761..24738)
DNA (978bp) protein (326aa)

This feature has no annotations

Displaying 23 items

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