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scnpilot_solids1_trim150_scaffold_785

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_785_1
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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264..1142
DNA (879bp) protein (293aa)
Uncharacterized membrane-anchored protein n=1 Tax=Clostridium pasteurianum BC1 RepID=R4K4B2_CLOPA rbh
uncharacterized membrane-anchored protein rbh
Uncharacterized membrane-anchored protein {ECO:0000313|EMBL:AGK96521.1}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum BC1.;"
scnpilot_solids1_trim150_scaffold_785_2
unknown

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comp(1089..1487)
DNA (399bp) protein (133aa)
ArsR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_785_3
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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1564..4539
DNA (2976bp) protein (992aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E689_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHN10787.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_785_4
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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4587..7397
DNA (2811bp) protein (937aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E689_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHN10787.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_785_5
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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8006..10351
DNA (2346bp) protein (782aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B7A5B1 rbh
X-Pro dipeptidyl-peptidase domain-containing protein
X-Pro dipeptidyl-peptidase domain protein {ECO:0000313|EMBL:ADP82375.1}; Flags: Precursor;; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
scnpilot_solids1_trim150_scaffold_785_6
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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10395..13292
DNA (2898bp) protein (966aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B49082 rbh
Uncharacterized protein {ECO:0000313|EMBL:EHN10787.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_785_7
Corynebacterium marinum, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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13352..14380
DNA (1029bp) protein (343aa)
Glycosyl transferase family 2 n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F7M7_VERMA
Uncharacterized protein {ECO:0000313|EMBL:AJK67897.1}; TaxID=1224162 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium marinum DSM 44953.;"
family 2 glycosyl transferase
scnpilot_solids1_trim150_scaffold_785_8

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14873..15349
DNA (477bp) protein (159aa)
cytochrome C biogenesis protein CcdA n=1 Tax=Patulibacter americanus RepID=UPI0003B78772
Uncharacterized protein {ECO:0000313|EMBL:KKK51130.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
cytochrome C biogenesis protein CcmE-like protein; K02197 cytochrome c-type biogenesis protein CcmE
scnpilot_solids1_trim150_scaffold_785_9
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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15342..17957
DNA (2616bp) protein (872aa)
Cytochrome c assembly protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F7Z7_CONWI
cytochrome C assembly protein; K02198 cytochrome c-type biogenesis protein CcmF
Cytochrome c assembly protein {ECO:0000313|EMBL:ADB52891.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids1_trim150_scaffold_785_10
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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17985..18209
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E871_9ACTN
preprotein translocase subunit SecG; K03075 preprotein translocase subunit SecG
Preprotein translocase, SecG subunit {ECO:0000313|EMBL:ADB52889.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids1_trim150_scaffold_785_11
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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18216..18617
DNA (402bp) protein (134aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZK1_CONWI
cupin
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:ADB53839.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids1_trim150_scaffold_785_12
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

18805..20055
DNA (1251bp) protein (417aa)
Alkane 1-monooxygenase (EC:1.14.15.3); K00496 alkane 1-monooxygenase [EC:1.14.15.3] rbh
Alkane 1-monooxygenase {ECO:0000313|EMBL:ADB54140.1}; EC=1.14.15.3 {ECO:0000313|EMBL:ADB54140.1};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Alkane 1-monooxygenase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1V9_CONWI rbh
scnpilot_solids1_trim150_scaffold_785_13
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

20052..20225
DNA (174bp) protein (58aa)
Rubredoxin n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1V8_CONWI
rubredoxin-type Fe(Cys)4 protein
Rubredoxin {ECO:0000256|RuleBase:RU003820}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids1_trim150_scaffold_785_14
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

20360..20854
DNA (495bp) protein (165aa)
Transcriptional regulator, TetR family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F1V7_CONWI
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ADB54138.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids1_trim150_scaffold_785_15
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

20851..21336
DNA (486bp) protein (162aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Phosphodiesterase, MJ0936 family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDZ9_CONWI
phosphodiesterase, MJ0936 family; K07095
scnpilot_solids1_trim150_scaffold_785_16
unknown

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comp(21374..21640)
DNA (267bp) protein (89aa)

This feature has no annotations

Displaying 16 items

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