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scnpilot_solids1_trim150_scaffold_1283

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1283_1
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(1..282)
DNA (282bp) protein (94aa)
FHA domain containing protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZE4_CONWI
FHA domain-containing protein
FHA domain containing protein {ECO:0000313|EMBL:ADB51909.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids1_trim150_scaffold_1283_2

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comp(297..557)
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Patulibacter medicamentivorans RepID=H0EBF0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KKL95920.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1283_3
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(697..1344)
DNA (648bp) protein (216aa)
CDP-alcohol phosphatidyltransferase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
CDP-alcohol phosphatidyltransferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZE6_CONWI
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:ADB51911.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids1_trim150_scaffold_1283_4
unknown

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1610..2188
DNA (579bp) protein (193aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1283_5
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(2175..3431)
DNA (1257bp) protein (419aa)
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC:1.17.7.1); K03526 (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1] rbh
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZF0_CONWI rbh
scnpilot_solids1_trim150_scaffold_1283_6
unknown

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3636..3782
DNA (147bp) protein (49aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1283_7

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4025..10990
DNA (6966bp) protein (2322aa)
RHS repeat-associated core domain protein n=1 Tax=Streptomyces turgidiscabies Car8 RepID=L7EWI1_9ACTO rbh
Putative large secreted protein {ECO:0000313|EMBL:AKA59505.1}; TaxID=1630017 species="Bacteria; environmental samples.;" source="uncultured bacterium NM_1663.;"
hypothetical protein rbh
scnpilot_solids1_trim150_scaffold_1283_8
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(11016..12116)
DNA (1101bp) protein (367aa)
peptidase M50; K11749 regulator of sigma E protease [EC:3.4.24.-] rbh
peptidase M50 n=1 Tax=Patulibacter americanus RepID=UPI0003B6FEB8 rbh
Peptidase M50 {ECO:0000313|EMBL:ADB51927.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids1_trim150_scaffold_1283_9
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(12113..13258)
DNA (1146bp) protein (382aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267); K00099 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] rbh
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubroba
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F068_CONWI rbh
scnpilot_solids1_trim150_scaffold_1283_10
unknown

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comp(13295..13465)
DNA (171bp) protein (57aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1283_11
unknown

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comp(13455..13796)
DNA (342bp) protein (114aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_1283_12
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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13966..16566
DNA (2601bp) protein (867aa)
Chaperone protein HtpG n=1 Tax=Nitrosospira sp. APG3 RepID=M5DJX5_9PROT rbh
Chaperone protein HtpG {ECO:0000313|EMBL:CCU63114.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
molecular chaperone of HSP90 family rbh
scnpilot_solids1_trim150_scaffold_1283_13
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(16573..17466)
DNA (894bp) protein (298aa)
phosphatidate cytidylyltransferase; K00981 phosphatidate cytidylyltransferase [EC:2.7.7.41]
Phosphatidate cytidylyltransferase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F070_CONWI
Phosphatidate cytidylyltransferase {ECO:0000313|EMBL:ADB51930.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids1_trim150_scaffold_1283_14
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(17466..18161)
DNA (696bp) protein (232aa)
Isoprenyl transferase {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.- {ECO:0000256|HAMAP-Rule:MF_01139};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
undecaprenyl diphosphate synthase (EC:2.5.1.31); K00806 undecaprenyl diphosphate synthase [EC:2.5.1.31] rbh
Isoprenyl transferase n=1 Tax=Patulibacter medicamentivorans RepID=H0E779_9ACTN rbh
scnpilot_solids1_trim150_scaffold_1283_15
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(18162..18725)
DNA (564bp) protein (188aa)
Ribosome-recycling factor n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F072_CONWI
ribosome recycling factor; K02838 ribosome recycling factor
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Displaying 15 items

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