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scnpilot_solids1_trim150_scaffold_1543

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_1543_1
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(151..1143)
DNA (993bp) protein (331aa)
pdhB; protein PdhB (EC:1.2.4.1); K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
Transketolase domain protein n=1 Tax=Frankia sp. EUN1f RepID=D3CU96_9ACTO rbh
Transketolase domain protein {ECO:0000313|EMBL:EFC85795.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
scnpilot_solids1_trim150_scaffold_1543_2
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1214..2197)
DNA (984bp) protein (328aa)
Pyruvate dehydrogenase (Acetyl-transferring) {ECO:0000313|EMBL:EFC85794.1}; EC=1.2.4.1 {ECO:0000313|EMBL:EFC85794.1};; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
pyruvate dehydrogenase; K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
Pyruvate dehydrogenase (Acetyl-transferring) n=1 Tax=Frankia sp. EUN1f RepID=D3CU95_9ACTO rbh
scnpilot_solids1_trim150_scaffold_1543_3
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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2259..2999
DNA (741bp) protein (247aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FD24_CONWI
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADB51536.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids1_trim150_scaffold_1543_4
Rhodococcus jostii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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2996..3778
DNA (783bp) protein (261aa)
3-hydroxybutyryl-CoA dehydratase (EC:4.2.1.55); K01715 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55]
Probable 3-hydroxybutyryl-CoA dehydratase {ECO:0000313|EMBL:ABH00682.1}; EC=4.2.1.55 {ECO:0000313|EMBL:ABH00682.1};; TaxID=101510 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus jostii (strain RHA1).;"
Probable 3-hydroxybutyryl-CoA dehydratase n=1 Tax=Rhodococcus sp. (strain RHA1) RepID=Q0RVK4_RHOSR
scnpilot_solids1_trim150_scaffold_1543_5
Rhodococcus jostii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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3782..4939
DNA (1158bp) protein (386aa)
isovaleryl-CoA dehydrogenase; K00253 isovaleryl-CoA dehydrogenase [EC:1.3.8.4] rbh
Possible isovaleryl-CoA dehydrogenase n=1 Tax=Rhodococcus sp. (strain RHA1) RepID=Q0RVK7_RHOSR rbh
Possible isovaleryl-CoA dehydrogenase {ECO:0000313|EMBL:ABH00679.1}; TaxID=101510 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus jostii (strain RHA1).;"
scnpilot_solids1_trim150_scaffold_1543_6
Streptomyces sp. AA4, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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4975..5646
DNA (672bp) protein (224aa)
Transcriptional regulator n=1 Tax=Streptomyces sp. AA4 RepID=D9V7A6_9ACTO
Transcriptional regulator {ECO:0000313|EMBL:EFL07299.1}; TaxID=591158 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AA4.;"
TetR family transcriptional regulator
scnpilot_solids1_trim150_scaffold_1543_7
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6591..7376)
DNA (786bp) protein (262aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6E847_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EHJ62387.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
hypothetical protein
scnpilot_solids1_trim150_scaffold_1543_8
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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7472..8296
DNA (825bp) protein (275aa)
Putative uncharacterized protein n=1 Tax=Saccharomonospora cyanea NA-134 RepID=H5XLN2_9PSEU
short-chain dehydrogenase/reductase SDR
Tax=RBG_16_Gamma2_60_9_curated
scnpilot_solids1_trim150_scaffold_1543_9
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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comp(8293..9813)
DNA (1521bp) protein (507aa)
AMP-dependent synthetase and ligase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZ49_RUBXD rbh
AMP-dependent synthetase and ligase rbh
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ABG03329.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
scnpilot_solids1_trim150_scaffold_1543_10
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

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9937..10830
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Candidatus Microthrix parvicella RepID=UPI00037474BF
SMP-30/Gluconolaconase/LRE domain protein {ECO:0000313|EMBL:CCM64251.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
SMP-30/gluconolaconase/LRE domain-containing protein
scnpilot_solids1_trim150_scaffold_1543_11
Rhodococcus rhodochrous, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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10841..12376
DNA (1536bp) protein (512aa)
O-succinylbenzoate--CoA ligase {ECO:0000313|EMBL:ETT28785.1}; EC=6.2.1.26 {ECO:0000313|EMBL:ETT28785.1};; TaxID=1429046 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus rhodochrous ATCC 21198.;"
AMP-dependent synthetase/ligase; K00666 fatty-acyl-CoA synthase [EC:6.2.1.-] rbh
AMP-dependent synthetase and ligase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B881_HERA2 rbh
Displaying 11 items

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