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scnpilot_solids1_trim150_scaffold_609_13

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(12375..13094)

Top 3 Functional Annotations

Value Algorithm Source
naeIV; very short patch repair endonuclease NaeI (EC:3.1.-.-); K07458 DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] similarity KEGG
DB: KEGG
  • Identity: 59.3
  • Coverage: 140.0
  • Bit_score: 161
  • Evalue 3.20e-37
NaeI very short patch repair endonuclease (V.NaeI) {ECO:0000313|EMBL:CEI32466.1}; EC=3.1.-.- {ECO:0000313|EMBL:CEI32466.1};; TaxID=1744 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium freudenreichii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.3
  • Coverage: 140.0
  • Bit_score: 161
  • Evalue 1.40e-36
NaeI very short patch repair endonuclease (V.NaeI) n=1 Tax=Propionibacterium freudenreichii subsp. shermanii (strain ATCC 9614 / CIP 103027 / CIRM-BIA1) RepID=D7GI73_PROFC similarity UNIREF
DB: UNIREF100
  • Identity: 59.3
  • Coverage: 140.0
  • Bit_score: 161
  • Evalue 1.00e-36

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Taxonomy

Propionibacterium freudenreichii → Propionibacterium → Propionibacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 720
ATGGATCAGGTACCCGACCCAATGGGGGCAAATCCGGAGGGCCGGACGGCGCGGGCTAGGTTGCGGCTTCCCTCTTGCGATAGCCCCCGAGGATCTCCGGTGGCTCCCCCGCTTCCGCCACTCACTGCCGACCAGGACCCGACGCGCAGTCGTCAACTCCGTAAGACCTGCGGGTCCGATCGGCCGGATCGCTTGTGGCTTCCCGCCAGTGAGCGGCGGCGACTGGGCCCGGCCTGCACCCTGCACTCAGATTTGGCCCGCGGTTACATTGATGAGATCACGCAGCTGCCTAGTCCACCCAAGGCTTCAAGTGCGGCAGTCCGGGCCACCATGCAGGGAAACCGGCGGCGCGACACCGTGCCCGAGAAGCGATTTCGGTCGGCCCTATTTGCCTTGGGCCTGCGCTTTCGCGTCGACCACCCGATTCGCCTATCTGACCAGCCCCGGCCAATCCGTCCCGACATCGTTTTCACGCGGGCCAAGATCGCTGTGTTCGTTGACGGCTGCTTCTGGCACGGATGCCCACAGCACGGCACTAGTCCTCGACGCAATAGCCAGTACTGGGACGCAAAGCTCGCGAGGAACCGTGAGAGAGACCGCCGATACGACACCTGGCTCTCATCGGCCGGGTGGACGGTAATGCGCTTCTGGGAGCACGATGAACCAAAGCGCGCAGCAGAACAGGTTGCACGAATGCTGGCTAAGCCTCGATCGGCTTGA
PROTEIN sequence
Length: 240
MDQVPDPMGANPEGRTARARLRLPSCDSPRGSPVAPPLPPLTADQDPTRSRQLRKTCGSDRPDRLWLPASERRRLGPACTLHSDLARGYIDEITQLPSPPKASSAAVRATMQGNRRRDTVPEKRFRSALFALGLRFRVDHPIRLSDQPRPIRPDIVFTRAKIAVFVDGCFWHGCPQHGTSPRRNSQYWDAKLARNRERDRRYDTWLSSAGWTVMRFWEHDEPKRAAEQVARMLAKPRSA*