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scnpilot_solids1_trim150_scaffold_967_4

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(3705..4634)

Top 3 Functional Annotations

Value Algorithm Source
Ti-type conjugative transfer relaxase TraA n=1 Tax=Patulibacter medicamentivorans RepID=H0E9B9_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 46.0
  • Coverage: 311.0
  • Bit_score: 251
  • Evalue 1.30e-63
Ti-type conjugative transfer relaxase TraA {ECO:0000313|EMBL:EHN09729.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.0
  • Coverage: 311.0
  • Bit_score: 251
  • Evalue 1.80e-63
traA; putative conjugal transfer protein similarity KEGG
DB: KEGG
  • Identity: 38.6
  • Coverage: 308.0
  • Bit_score: 180
  • Evalue 8.70e-43

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Taxonomy

Patulibacter medicamentivorans → Patulibacter → Solirubrobacterales → Thermoleophilia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 930
ATGCTCTCCATCGGGAAGCTCGGCGTCGGCCAGGAGGCCTACTACACCGAACGGGTCGCCGAAGGCGCCGAGGATTACTACTCGGGCCGGGGTGAGGCCGAGGGCTATTGGATCGGCTCCGCCGCCCGCGACCTGGGGCTCGACGGCAAGGTCGACCCCGACGAACTGACCGCGATGCTGACCGGTCGCCATCCGGCGACCGGCGGGCCGCTCGGCCTCCGCCACGTCGCCGGACGTGGCCCCGTCCCCGGCTTCGACCTCACCTTCTCGGCGCCGAAGTCGGTCTCGCTGACCTGGGCGCTCGGCAGCGAGGGCGCCGGGGCCGAGGTCGCCGCCGCCCACAAGGCATCCGTCGCCGCCGCGCTCGACTACATGGAGCGGATGGCCTGCTGGACCCGGCGCGGCCACGGCGGGCGCGAGTTCGTCCACGGCAACGGCTTCCTCGCCGCCGCCTACCTCCATCGCTCCTCGCGCGCCGGCGACCCCCAGCTCCACAACCACGTCCTCCTCGCCAACGCGACCCGAGGGCCGGACGGCCGCTGGACCCGGCTCTACCACCCGGCGATCTACGACCACGCGAAGAGCGCCGGTTACATCTACGAGGCGAACCTTCGCCACGAGCTGACCCGCAGGCTCGGCGTCCGCTGGCGGGAGGTCGCCAACGGCATCGCCGAGATCGAGGGCTTCGACCCCGAGCACCTCCGTGCCTTCTCGACCCGGCGCGCCGAGATCCTCGCCGCCACCGCGTCCGACGCATCCGCCCGCGCCCGCCAGGTCGCCACCCTGGAGACGCGAAGGGCCAAGGACCGCGACCTGACCGAGGAGAGCCTGCGCGAGAGGTGGCGGTCGACGGCCGAGGAGATCGGCCTCGACCGCGAGGCGATCCGTCGGACCTTCGGCCGCGTCCGGAGGTCGCTCCGCCGAGGGTGA
PROTEIN sequence
Length: 310
MLSIGKLGVGQEAYYTERVAEGAEDYYSGRGEAEGYWIGSAARDLGLDGKVDPDELTAMLTGRHPATGGPLGLRHVAGRGPVPGFDLTFSAPKSVSLTWALGSEGAGAEVAAAHKASVAAALDYMERMACWTRRGHGGREFVHGNGFLAAAYLHRSSRAGDPQLHNHVLLANATRGPDGRWTRLYHPAIYDHAKSAGYIYEANLRHELTRRLGVRWREVANGIAEIEGFDPEHLRAFSTRRAEILAATASDASARARQVATLETRRAKDRDLTEESLRERWRSTAEEIGLDREAIRRTFGRVRRSLRRG*