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scnpilot_solids1_trim150_scaffold_967

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_solids1_trim150_scaffold_967_1
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..968)
DNA (966bp) protein (322aa)
Site-specific recombinase, phage integrase family n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YPB3_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EHM52772.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
Site-specific recombinase XerD
scnpilot_solids1_trim150_scaffold_967_2

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comp(1226..1501)
DNA (276bp) protein (92aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL60474.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
scnpilot_solids1_trim150_scaffold_967_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1516..3708)
DNA (2193bp) protein (731aa)
MobA/MobL protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q20XU4_RHOPB
conjugal transfer relaxase TraA
MobA/MobL protein {ECO:0000313|EMBL:ABD90042.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
scnpilot_solids1_trim150_scaffold_967_4
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(3705..4634)
DNA (930bp) protein (310aa)
Ti-type conjugative transfer relaxase TraA n=1 Tax=Patulibacter medicamentivorans RepID=H0E9B9_9ACTN
Ti-type conjugative transfer relaxase TraA {ECO:0000313|EMBL:EHN09729.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
traA; putative conjugal transfer protein
scnpilot_solids1_trim150_scaffold_967_5
unknown

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5067..5405
DNA (339bp) protein (113aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_967_6
unknown

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5559..5678
DNA (120bp) protein (40aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_967_7
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(6179..6604)
DNA (426bp) protein (142aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Ribonuclease VapC n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEA2_CONWI
nucleotide binding protein PINc
scnpilot_solids1_trim150_scaffold_967_8
unknown

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comp(6601..6852)
DNA (252bp) protein (84aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_967_9
Rhodococcus wratislaviensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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7008..7610
DNA (603bp) protein (201aa)
Bifunctional deaminase-reductase domain-containing protein n=2 Tax=Rhodococcus RepID=L2TJ37_9NOCA rbh
bifunctional deaminase-reductase domain-containing protein rbh
Bifunctional deaminase-reductase domain-containing protein {ECO:0000313|EMBL:ELB89956.1}; TaxID=1195242 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus wratislaviensis IFP 2016.;"
scnpilot_solids1_trim150_scaffold_967_10
unknown

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8029..9036
DNA (1008bp) protein (336aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_967_11
unknown

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9089..9367
DNA (279bp) protein (93aa)

This feature has no annotations

scnpilot_solids1_trim150_scaffold_967_12
Burkholderia jiangsuensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9450..10283)
DNA (834bp) protein (278aa)
Alpha/beta hydrolase fold n=1 Tax=Burkholderia sp. RPE64 RepID=R4WYD4_9BURK
Alpha/beta hydrolase {ECO:0000313|EMBL:KAK48835.1}; TaxID=1458357 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia jiangsuensis.;"
alpha/beta hydrolase fold
scnpilot_solids1_trim150_scaffold_967_13
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(10280..10705)
DNA (426bp) protein (142aa)
D-tyrosyl-tRNA(Tyr) deacylase; K07560 D-tyrosyl-tRNA(Tyr) deacylase [EC:3.1.-.-]
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160046};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F305_CONWI
scnpilot_solids1_trim150_scaffold_967_14
Streptomyces roseochromogenus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(10716..11600)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Streptomyces roseochromogenes subsp. oscitans DS 12.976 RepID=V6KVQ4_STRRC
Uncharacterized protein {ECO:0000313|EMBL:EST36103.1}; TaxID=1352936 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces roseochromogenus subsp. oscitans DS 12.976.;"
alpha/beta hydrolase fold protein
scnpilot_solids1_trim150_scaffold_967_15
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11617..12924)
DNA (1308bp) protein (436aa)
threonine synthase; K01733 threonine synthase [EC:4.2.3.1]
Strongly similar to threonine synthase id=1945494 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
scnpilot_solids1_trim150_scaffold_967_16

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13201..13461
DNA (261bp) protein (87aa)
Uncharacterized protein {ECO:0000313|EMBL:KKL04559.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
scnpilot_solids1_trim150_scaffold_967_17
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(13882..16134)
DNA (2253bp) protein (751aa)
tRNA synthetase class I (M) n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZZ0_CONWI rbh
tRNA synthetase class I (M) rbh
tRNA synthetase class I (M) {ECO:0000313|EMBL:ADB49966.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids1_trim150_scaffold_967_18
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(16189..16635)
DNA (447bp) protein (149aa)
GtrA family protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F3W2_CONWI
GtrA family protein
GtrA family protein {ECO:0000313|EMBL:ADB54337.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
scnpilot_solids1_trim150_scaffold_967_19
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(16632..18227)
DNA (1596bp) protein (532aa)
Membrane protein-like protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZS2_CONWI
hypothetical protein
Membrane protein-like protein {ECO:0000313|EMBL:ADB53910.1}; Flags: Precursor;; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
Displaying 19 items

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