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scnpilot_solids1_trim150_scaffold_790_10

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(12296..13171)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Arthrobacter sp. 131MFCol6.1 RepID=UPI000380F610 similarity UNIREF
DB: UNIREF100
  • Identity: 61.0
  • Coverage: 269.0
  • Bit_score: 332
  • Evalue 5.40e-88
  • rbh
Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:ETK36443.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.4
  • Coverage: 263.0
  • Bit_score: 341
  • Evalue 1.60e-90
ABC transporter permease protein similarity KEGG
DB: KEGG
  • Identity: 60.7
  • Coverage: 267.0
  • Bit_score: 326
  • Evalue 9.30e-87
  • rbh

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Taxonomy

Microbispora sp. ATCC PTA-5024 → Microbispora → Streptosporangiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 876
ATGAGACTCTCCAGGCGCGGCAAGATCCTCCTGCGGGCGGCGGTCGCGCTGGCGCTCGCCTTCATCTACATCCCGCTGCTGGTGATCGTGGTCGAGGCGTTCAACTCGAGCCGCATCCTCAAATGGCCGCCGCCGGGCTTCACCTTCAGCTGGTTCGGCAAGGCCTTCGAATCCGACAGCGCCCGCGAAGCGCTGGTCACCTCGATCGAGGCGGGCGTGGTGGCGATGCTGATCGCGATCACCCTCGGGACCCTGATCGCGCTGGCGGTCGGGCGGCGGCGCTTCTTCGGCCGCGACACGATCTCCTTCCTCGTCGTCCTGCCGATCGCCCTGCCGGGGATCGTCACCGGCGTCGCGCTCTCCAACACCTTCACCCAGGTCCTCGGGATCAGCCTCAGCCTGATGACGGTGATCGTCGGCCACGCCACCTTCTGCATCGTCGTCGTCTACAACAACGTGGTGGCGCGCCTGCGCCGCACCTCGGGTTCCTTCGAGGAAGCCTCCGCCGACCTCGGCGCCGACCCCTGGCAGACCTTCCGCTGGGTCACCTTCCCCTCCCTGCGCAGCGCCCTCGGCGCCGGCGCCCTGCTCGCCTTCGCCCTCTCCTTCGACGAGATCATCGTCACCAACTTCACCATCGGCGCGGGCGAAGAAACCCTGCCGATCTGGATCTACCACAACCTCTTCCGCCCCAAAGAGCTGCCGGTCGTCCCCGCCGTCGCGGTGATCCTGATCATCCTCTCGATCATCCCCGTCTACCTCGCCCACCGCCTCTCCAGCGACGATGCCGGCCTCACCCCCGGCCGCGGCGGCGGTGCCGCGCCGACCGCCGCCCCCGCCGCGATCGCCGAGGCGGAGGCCACCGCCGCGCACTAG
PROTEIN sequence
Length: 292
MRLSRRGKILLRAAVALALAFIYIPLLVIVVEAFNSSRILKWPPPGFTFSWFGKAFESDSAREALVTSIEAGVVAMLIAITLGTLIALAVGRRRFFGRDTISFLVVLPIALPGIVTGVALSNTFTQVLGISLSLMTVIVGHATFCIVVVYNNVVARLRRTSGSFEEASADLGADPWQTFRWVTFPSLRSALGAGALLAFALSFDEIIVTNFTIGAGEETLPIWIYHNLFRPKELPVVPAVAVILIILSIIPVYLAHRLSSDDAGLTPGRGGGAAPTAAPAAIAEAEATAAH*