ggKbase home page

scnpilot_solids1_trim150_scaffold_790_11

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(13185..14072)

Top 3 Functional Annotations

Value Algorithm Source
spermidine/putrescine ABC transporter permease id=4195233 bin=GWC2_Chloroflexi_73_18 species=unknown genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 58.6
  • Coverage: 285.0
  • Bit_score: 342
  • Evalue 4.00e-91
  • rbh
putative spermidine/putrescine transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 54.2
  • Coverage: 288.0
  • Bit_score: 319
  • Evalue 1.10e-84
  • rbh
Tax=RBG_16_RIF_CHLX_69_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 57.9
  • Coverage: 292.0
  • Bit_score: 342
  • Evalue 4.30e-91

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_RIF_CHLX_69_14_curated → RIF-CHLX → Bacteria

Sequences

DNA sequence
Length: 888
GTGGCGACTGACGCGGTAATCGTGAAGAGGTCGGCGGGCAGACGGCTCGCCGGCTTCTTCAACGGCCGCCCCCGGTTGCAGATCGGGTCGCTGCTGGCGGCCCCGATGGCGTGGTTGGTGATCCTCTACCTGGGGTCGCTGGTCGTCCTCCTGATCACCGCCTTCTGGACGGTCGACCCGCTCAGCGGCTCGGTGATCAAGGAACTCAGCTGGCAGAACTTCGAAGAACTCGTCAACGTCCCGGTCTACCGCGAGATCGTCTGGCGGACGGTCCGCACGGCGGCGCTGGTGACGATCACCGACGCGCTCATCGCCTTCCCGATCGCCTTCTACATGGCGAAGGTGGCGGGCCGGAAGACCAAGGCGGCGCTGGTCGTCGCGGTGCTGATGCCGCTCTGGGCCAGCTACCTGGTGAAGATCATCGCCTGGCGGGCGATCCTGGCCGAACACGGGGTGCTGAACTGGGCGCTCGAACCGATCGGCCTGCACGGGCCGGGGACGGGCGTCGCCTCGGTGTGGCTGGTGATGAGCTACCTCTGGCTGCCGTACATGATCCTGCCGATCTTCGCCGGGCTGGAACGGATCCCGGACTCGCTGATCGCCGCCTCCGAGGACCTCGGCGCGCACCCCTTCACCACCTTCCGCAAGGTGATCCTGCCGCTCTCGTTCCCGGCCGTGGTGGCGGGCTCGATCTTCACCTTCTCGCTGACCCTCGGCGACTACCTGGCGCCGAAACTCGTCTCCAACGAACAGTTCATCGGCACCTCGATCTTCGACTCGATCACCAACAACCAGCCCTTCGCGGCGGCCTTCGCCCTGGTGCCGATCGTCGTCGTGATCGCCTACCTCGGCGTCGCCCGCAAGCTCGGCGCCTTCGAACACGTGTGA
PROTEIN sequence
Length: 296
VATDAVIVKRSAGRRLAGFFNGRPRLQIGSLLAAPMAWLVILYLGSLVVLLITAFWTVDPLSGSVIKELSWQNFEELVNVPVYREIVWRTVRTAALVTITDALIAFPIAFYMAKVAGRKTKAALVVAVLMPLWASYLVKIIAWRAILAEHGVLNWALEPIGLHGPGTGVASVWLVMSYLWLPYMILPIFAGLERIPDSLIAASEDLGAHPFTTFRKVILPLSFPAVVAGSIFTFSLTLGDYLAPKLVSNEQFIGTSIFDSITNNQPFAAAFALVPIVVVIAYLGVARKLGAFEHV*