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scnpilot_solids1_trim150_scaffold_1428_5

Organism: SCNPILOT_SOLID_1_TRIM150_Actinobacteria_71_9

near complete RP 50 / 55 MC: 3 BSCG 49 / 51 MC: 2 ASCG 10 / 38 MC: 1
Location: comp(4507..5127)

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein TetR n=1 Tax=Mycobacterium rhodesiae JS60 RepID=G4HXW0_MYCRH similarity UNIREF
DB: UNIREF100
  • Identity: 38.2
  • Coverage: 220.0
  • Bit_score: 132
  • Evalue 5.80e-28
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 36.3
  • Coverage: 190.0
  • Bit_score: 124
  • Evalue 3.80e-26
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 41.8
  • Coverage: 201.0
  • Bit_score: 144
  • Evalue 1.60e-31

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Taxonomy

RBG_19FT_COMBO_Actinobacteria_70_19_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 621
GTGAGTCCCCGTCCCAGCATCGACCACATCCGCCGCCCGCAGATCCTCGCGGCCGCGGCCGAGGTGATCGTCGAGCGCGGGGTGGCGGGGACGCGGATCGCCGACGTCGCGGAGCGCTGCGGGGTCAGCCCGCCGGCCCTCCTCTACTGGTTCGACTCCAAGGAGCAACTGCTGGCCGAGGCGCTGACCGTCGACGACGATCGCTTCTACGAGGAACTGGAGGCGCGGGTCGACGGGGCGGCGGCGCCGGGCGAGCGGATGGTCGCCCTTATAGAGACCGCGACCGAGAGCGCCGACGACTTCGCGCTCTGGATGGAGCTCTGGACCTGGGCCCTCCGTGATGCCGACCTGCGCGCCGCCCGCGAGCGCTTCGACGCCCGCTGGCGCGCGGCGATCGAGGCGATCGTCATCGACGGCGTCGCGACCGGCGAATTCGGCGCCGCCGACCCGGCGCAGGCGGCGCTCGCGATCGCGGCGCTGATCGACGGCCTCTCCGCCCAGGCGGCGCTCGGCGACCCGGAGGTGACGAACCCGCGCCTCACCGAGACGGTCCTGGCGAGCGCCGAACGGCTCCTGGGCGCGGAGTTACCCGCCGGCGCGGGAGGGCGAGCATCGCCCTGA
PROTEIN sequence
Length: 207
VSPRPSIDHIRRPQILAAAAEVIVERGVAGTRIADVAERCGVSPPALLYWFDSKEQLLAEALTVDDDRFYEELEARVDGAAAPGERMVALIETATESADDFALWMELWTWALRDADLRAARERFDARWRAAIEAIVIDGVATGEFGAADPAQAALAIAALIDGLSAQAALGDPEVTNPRLTETVLASAERLLGAELPAGAGGRASP*